RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 CACTIN-AS1Q8N1I8 211 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 IGSF8Q969P0 613 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 ROGDIQ9GZN7 287 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 MMP28Q9H239 520 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 ELOVL2Q9NXB9 296 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 NLRC5Q86WI3 1866 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 A0A1W2PQH9 124 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 GLTPD2A6NH11 291 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 TFECO14948 347 aaPredicted RBP16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 RAMP2O60895 175 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 KCNK5O95279 499 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 C1QCP02747 245 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 SMIM10L2AP0DMW4 78 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 SMIM10L2BP0DMW5 78 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 M6PRP20645 277 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 OR3A3P47888 321 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 TP53BP2Q13625 1128 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 GPR162Q16538 588 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 SLC39A12Q504Y0 691 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 FAM124AQ86V42 546 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 C7orf34Q96L11 122 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 SRRQ9GZT4 340 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 ZNF226Q9NYT6 803 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 KLHL20Q9Y2M5 609 aa16.58■□□□□ 0.24
SQSTM1-211ENST00000506690 IQCF5A8MTL0 148 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 HAS3O00219 553 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 GPR182O15218 404 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 PRAMEF11O60813 436 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 ZNF780AO75290 641 aaPredicted RBP16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 GLUD1P00367 558 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 ITGB1P05556 798 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 ACVRL1P37023 503 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 MLLT3P42568 568 aaPredicted RBP16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 SGO1Q5FBB7 561 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 CCDC28AQ8IWP9 274 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 IQCF2Q8IXL9 164 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 ZFAND1Q8TCF1 268 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 GPR151Q8TDV0 419 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 USP7Q93009 1102 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 GPRC5BQ9NZH0 403 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 DLGAP4Q9Y2H0 992 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 COMMD10Q9Y6G5 202 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 MYO16Q9Y6X6 1858 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 A0A1W2PQ09 198 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 SLC35F4A4IF30 521 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 MANBAO00462 879 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 ALPPP05187 535 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 MC4RP32245 332 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 NUDT1P36639 197 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 ZNF792Q3KQV3 632 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 ZNF605Q86T29 641 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 RDH10Q8IZV5 341 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 FAM109AQ8N4B1 249 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 DENND6BQ8NEG7 585 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 C9orf43Q8TAL5 461 aaPredicted RBP16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 OR5M11Q96RB7 305 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 MGLLQ99685 303 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 PAAF1Q9BRP4 392 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 CDCA4Q9BXL8 241 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 BARHL1Q9BZE3 327 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 MKRN2Q9H000 416 aaKnown RBP16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 TOR4AQ9NXH8 423 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 DNMT3LQ9UJW3 386 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 PPT2Q9UMR5 302 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 DHRS7Q9Y394 339 aa16.57■□□□□ 0.24
SQSTM1-211ENST00000506690 C2orf81A6NN90 581 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 RFXANKO14593 260 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 GPX5O75715 221 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 THP07101 528 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 SMPD1P17405 629 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 BNC1Q01954 994 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 FCHO2Q0JRZ9 810 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 ASAH1Q13510 395 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 TSTQ16762 297 aaKnown RBP16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 FBXL22Q6P050 247 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 ERICH5Q6P6B1 374 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 PTOV1Q86YD1 416 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 CPA6Q8N4T0 437 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 TESCQ96BS2 214 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 WDFY2Q96P53 400 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 HHIPQ96QV1 700 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 CITED4Q96RK1 184 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 TAPBPLQ9BX59 468 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 SLC22A4Q9H015 551 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 TAS2R16Q9NYV7 291 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 UBA2Q9UBT2 640 aaPredicted RBP16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 TRPS1Q9UHF7 1281 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 CPA4Q9UI42 421 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 FKBPLQ9UIM3 349 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 PRELID1Q9Y255 219 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 PCDHGB3Q9Y5G1 929 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 EFCAB10A6NFE3 127 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 RGS5O15539 181 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 ERP29P30040 261 aaKnown RBP16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 TARDBPQ13148 414 aaKnown RBP eCLIP16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 SSX1Q16384 188 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 TRIM71Q2Q1W2 868 aaKnown RBP16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 RAP1GAP2Q684P5 730 aa16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 PDE12Q6L8Q7 609 aaKnown RBP16.56■□□□□ 0.24
SQSTM1-211ENST00000506690 SYCE2Q6PIF2 218 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms