RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 WASHC2DQ5SRD0 308 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 ZNF385CQ66K41 422 aaPredicted RBP15.96■□□□□ 0.15
SNCA-209ENST00000506244 FRMPD2BQ6IN97 320 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 FAM199XQ6PEV8 388 aaPredicted RBP15.96■□□□□ 0.15
SNCA-209ENST00000506244 GPSM1Q86YR5 675 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 CSNK1A1LQ8N752 337 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 LSM14AQ8ND56 463 aaKnown RBP15.96■□□□□ 0.15
SNCA-209ENST00000506244 LRRN4CLQ8ND94 238 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 KIAA1191Q96A73 305 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 THAP11Q96EK4 314 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 WBP1Q96G27 269 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 SNX15Q9NRS6 342 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 DHCR7Q9UBM7 475 aaKnown RBP15.96■□□□□ 0.15
SNCA-209ENST00000506244 NDOR1Q9UHB4 597 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 ZNF180Q9UJW8 692 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 RNF112Q9ULX5 631 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 ACOT9Q9Y305 439 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 DYRK1BQ9Y463 629 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 ANKRD12Q6UB98 2062 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 H0YGG7 62 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 H7BY64 318 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 HAT1O14929 419 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 PRPF4O43172 522 aaKnown RBP eCLIP15.95■□□□□ 0.14
SNCA-209ENST00000506244 NRP2O60462 931 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 EIF2S1P05198 315 aaKnown RBP15.95■□□□□ 0.14
SNCA-209ENST00000506244 PRKAR1AP10644 381 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 CDH1P12830 882 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 ALAS2P22557 587 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 F8A1P23610 371 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 TYK2P29597 1187 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 GCGRP47871 477 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 CCR8P51685 355 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 ARF3P61204 181 aaPredicted RBP15.95■□□□□ 0.14
SNCA-209ENST00000506244 YBX1P67809 324 aaKnown RBP15.95■□□□□ 0.14
SNCA-209ENST00000506244 NKAIN1Q4KMZ8 207 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 C1orf189Q5VU69 101 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 GARNL3Q5VVW2 1013 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 KLC3Q6P597 504 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 TTLL10Q6ZVT0 673 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 ENDOVQ8N8Q3 282 aaKnown RBP15.95■□□□□ 0.14
SNCA-209ENST00000506244 STAG3L4Q8TBR4 150 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 FKBP10Q96AY3 582 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 PYCR2Q96C36 320 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 CABS1Q96KC9 395 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 PRAP1Q96NZ9 151 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 WWOXQ9NZC7 414 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 IFT80Q9P2H3 777 aaPredicted RBP15.95■□□□□ 0.14
SNCA-209ENST00000506244 FARSAQ9Y285 508 aaKnown RBP15.95■□□□□ 0.14
SNCA-209ENST00000506244 MRPS18BQ9Y676 258 aaKnown RBP15.95■□□□□ 0.14
SNCA-209ENST00000506244 KCNE2Q9Y6J6 123 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 HEATR5BQ9P2D3 2071 aa15.95■□□□□ 0.14
SNCA-209ENST00000506244 ZFYVE26Q68DK2 2539 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 LOC105369274A0A096LPK9 316 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 LOC102723532A0A0G2JNH3 316 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 HYKKA2RU49 373 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 NCF1BA6NI72 391 aaPredicted RBP15.94■□□□□ 0.14
SNCA-209ENST00000506244 SYCE1LA8MT33 242 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 NCF1CA8MVU1 366 aaPredicted RBP15.94■□□□□ 0.14
SNCA-209ENST00000506244 RIPK2O43353 540 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 CTSBP07858 339 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 NCF1P14598 390 aaPredicted RBP15.94■□□□□ 0.14
SNCA-209ENST00000506244 NPPBP16860 134 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 PRTGQ2VWP7 1150 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 UBAP2Q5T6F2 1119 aaKnown RBP15.94■□□□□ 0.14
SNCA-209ENST00000506244 LGSNQ5TDP6 509 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 SULT1C3Q6IMI6 304 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 PRMT9Q6P2P2 845 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 C16orf46Q6P387 395 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 FBXO42Q6P3S6 717 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 BORAQ6PGQ7 559 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 THOC6Q86W42 341 aaKnown RBP15.94■□□□□ 0.14
SNCA-209ENST00000506244 OR4N4Q8N0Y3 316 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 SPATA6LQ8N4H0 392 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 ABHD11Q8NFV4 315 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 SLC5A11Q8WWX8 675 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 RHBDF1Q96CC6 855 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 MVB12AQ96EY5 273 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 OR2A5Q96R48 311 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 ARHGAP9Q9BRR9 750 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 UNKQ9C0B0 810 aaKnown RBP15.94■□□□□ 0.14
SNCA-209ENST00000506244 AKIRIN1Q9H9L7 192 aaPredicted RBP15.94■□□□□ 0.14
SNCA-209ENST00000506244 NUDT4Q9NZJ9 180 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 CD274Q9NZQ7 290 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 TCFL5Q9UL49 500 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 POLHQ9Y253 713 aa15.94■□□□□ 0.14
SNCA-209ENST00000506244 KCNE1BA0A087WTH5 132 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 A0A096LPK6 155 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 POC1B-GALNT4F8VUJ3 575 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 ATXN7O15265 892 aaPredicted RBP15.93■□□□□ 0.14
SNCA-209ENST00000506244 NKX2-8O15522 239 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 KERAO60938 352 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 C2P06681 752 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 TFEBP19484 476 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 CYP4F2P78329 520 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 CSNK1G2P78368 415 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 OR4D1Q15615 310 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 NDUFA9Q16795 377 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 UGT8Q16880 541 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 KLHDC8AQ8IYD2 350 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 PDPRQ8NCN5 879 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms