RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 C14orf105Q9NVL8 296 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 ACAD8Q9UKU7 415 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 DTX4Q9Y2E6 619 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 MAGED1Q9Y5V3 778 aaPredicted RBP3.09□□□□□ -1.91
TCOF1-208ENST00000506063 MUC4Q99102 2169 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 LOC105369274A0A096LPK9 316 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 LOC102723532A0A0G2JNH3 316 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 LOC100289279A0A1B0GTE1 492 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 FAM170AA1A519 330 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 MGAT4DA6NG13 374 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 ARHGAP42A6NI28 874 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 C2CD4BA6NLJ0 364 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 OR2AG2A6NM03 316 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 GOLGA6L22H0YM25 854 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 POLR2DO15514 142 aaKnown RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 MAP3K7O43318 606 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 MED7O43513 233 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 FOXS1O43638 330 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 CALUO43852 315 aaPredicted RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 MYL1P05976 194 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 HEXBP07686 556 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 CHRM5P08912 532 aaPredicted RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 HKR1P10072 659 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 PRKCSHP14314 528 aaPredicted RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 PFKFB1P16118 471 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 TPH1P17752 444 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 HNF1AP20823 631 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 FBLP22087 321 aaKnown RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 MMP8P22894 467 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 PBLDP30039 288 aaPredicted RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 CDH5P33151 784 aaPredicted RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 HSPA9P38646 679 aaKnown RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 GRIA3P42263 894 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 SYKP43405 635 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 FMO5P49326 533 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 GZMKP49863 264 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 LGALS3BPQ08380 585 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 FAM27E3Q08E93 113 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 MMRN1Q13201 1228 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 STIM1Q13586 685 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 BOP1Q14137 746 aaKnown RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 SLC10A1Q14973 349 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 SIX1Q15475 284 aaPredicted RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 PCSK7Q16549 785 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 QPCTQ16769 361 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 CDO1Q16878 200 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 PRTGQ2VWP7 1150 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 PGGHGQ32M88 737 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 RALGPS1Q5JS13 557 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 WLSQ5T9L3 541 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 RESP18Q5W5W9 173 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 NSUN5P2Q63ZY6 315 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 FRMPD2BQ6IN97 320 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 RHOUQ7L0Q8 258 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF550Q7Z398 422 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 TMC3Q7Z5M5 1100 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 MILR1Q7Z6M3 343 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 ANKRD37Q7Z713 158 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 LUZP2Q86TE4 346 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 RPS19BP1Q86WX3 136 aaKnown RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 LACC1Q8IV20 430 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 OR4N4Q8N0Y3 316 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 FBXW8Q8N3Y1 598 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 FAM109AQ8N4B1 249 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF441Q8N8Z8 693 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 BANPQ8N9N5 519 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 C9orf106Q8NAJ2 232 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 PHC3Q8NDX5 983 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 OR2L2Q8NH16 312 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 ANKRD9Q96BM1 317 aaPredicted RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 SARAFQ96BY9 339 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 TRMT61AQ96FX7 289 aaKnown RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF599Q96NL3 588 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 WWC2-AS2Q96NR7 200 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 QRFPRQ96P65 431 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 TRIB1Q96RU8 372 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 CYTH2Q99418 400 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 RHNO1Q9BSD3 238 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 RBM4Q9BWF3 364 aaKnown RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 PHACTR1Q9C0D0 580 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 BHLHE41Q9C0J9 482 aaPredicted RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 RBSNQ9H1K0 784 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 OR52A5Q9H2C5 316 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 MANSC1Q9H8J5 431 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 RMND1Q9NWS8 449 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 IRAK4Q9NWZ3 460 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 ARL15Q9NXU5 204 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 ALKBH4Q9NXW9 302 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 PKD2L2Q9NZM6 624 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 PDP1Q9P0J1 537 aaPredicted RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 TRPC4Q9UBN4 977 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 NDRG3Q9UGV2 375 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 LIPT1Q9Y234 373 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 CHKBQ9Y259 395 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 DNMT3AQ9Y6K1 912 aaPredicted RBP3.08□□□□□ -1.92
TCOF1-208ENST00000506063 COLEC10Q9Y6Z7 277 aa3.08□□□□□ -1.92
TCOF1-208ENST00000506063 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 TRGV5A0A0B4J1U4 118 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 FRG2CA6NGY1 282 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms