RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CHFRQ96EP1 664 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 CIB1Q99828 191 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 S1PR5Q9H228 398 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 WDR26Q9H7D7 661 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 BTNL2Q9UIR0 455 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 ASF1AQ9Y294 204 aa16.69■□□□□ 0.26
TRAPPC11-204ENST00000505676 IGLON5A6NGN9 336 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 PCCBP05166 539 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 ZCCHC18P0CG32 403 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 COX7A2P14406 83 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 NCK1P16333 377 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 DDX5P17844 614 aaKnown RBP16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 TIA1P31483 386 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 TAS2R38P59533 333 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 NFE2L1Q14494 772 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 CYP2A13Q16696 494 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 PGS1Q32NB8 556 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 R3HCC1LQ7Z5L2 792 aaKnown RBP16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 CHERPQ8IWX8 916 aaKnown RBP16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 TIMM29Q9BSF4 260 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 CHID1Q9BWS9 393 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 ANKRD60Q9BZ19 345 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 PELI2Q9HAT8 420 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 CD320Q9NPF0 282 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 ZNF639Q9UID6 485 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 WBP11Q9Y2W2 641 aaKnown RBP16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 MAGEB17A8MXT2 336 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 SCAMP2O15127 329 aaKnown RBP16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 PCNAP12004 261 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 TACR1P25103 407 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 CTBSQ01459 385 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 PRAMEF14Q5SWL7 426 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 PRAMEF13Q5VWM6 474 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 PARM1Q6UWI2 310 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 PGBD3Q8N328 593 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 OR5K2Q8NHB8 316 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 ASB12Q8WXK4 309 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 NECTIN4Q96NY8 510 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 MTERF1Q99551 399 aaKnown RBP16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 GABRG3Q99928 467 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 TRIM8Q9BZR9 551 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 ATAD3AQ9NVI7 634 aa16.68■□□□□ 0.26
TRAPPC11-204ENST00000505676 CKAP5Q14008 2032 aa16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 PIPSLA2A3N6 862 aa16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 CXCR6O00574 342 aa16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 PRSS23O95084 383 aa16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 EPN2O95208 641 aa16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 KIR2DL1P43626 348 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 PHC1P78364 1004 aa16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 SLBPQ14493 270 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 NAIF1Q69YI7 327 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 PLA2G15Q8NCC3 412 aa16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 TFGQ92734 400 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 MTERF3Q96E29 417 aa16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 PHF12Q96QT6 1004 aa16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 C1QTNF2Q9BXJ5 285 aa16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 LMCD1Q9NZU5 365 aa16.67■□□□□ 0.26
TRAPPC11-204ENST00000505676 RNF103-CHMP3A0A140T963 221 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 VGLL3A8MV65 326 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 CLOCKO15516 846 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 LINC01565O15544 149 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 MYCLP1P12525 358 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 PTPN6P29350 595 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 NTSR1P30989 418 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 GSTM5P46439 218 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 NRF1Q16656 503 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 UGT8Q16880 541 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 AAK1Q2M2I8 961 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 CARM1Q86X55 608 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 FGF14Q92915 247 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 FAM162AQ96A26 154 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 RDH12Q96NR8 316 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 RAB11FIP5Q9BXF6 653 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 MRPS26Q9BYN8 205 aaKnown RBP16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 BHLHE41Q9C0J9 482 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 REXO4Q9GZR2 422 aaKnown RBP16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 TRIT1Q9H3H1 467 aaKnown RBP16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 NT5DC2Q9H857 520 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 PREBQ9HCU5 417 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 DMRT3Q9NQL9 472 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 PNPLA3Q9NST1 481 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 AHSPQ9NZD4 102 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 ATP6V1HQ9UI12 483 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 C7orf72A4D263 438 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 PLRG1O43660 514 aaKnown RBP16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 ANXA4P09525 319 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 SLC35G4P0C7Q5 338 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 GZMMP51124 257 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 GALK1P51570 392 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 ZNF763Q0D2J5 394 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 SGCGQ13326 291 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 DDX39BQ13838 428 aaKnown RBP16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 SLC44A4Q53GD3 710 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 NHSL2Q5HYW2 709 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 C6orf52Q5T4I8 152 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 CPTPQ5TA50 214 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 IKBIPQ70UQ0 350 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 CBR4Q8N4T8 237 aa16.66■□□□□ 0.26
TRAPPC11-204ENST00000505676 C1orf52Q8N6N3 182 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms