RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 SCN3AQ9NY46 2000 aa5.56□□□□□ -1.52
GYPB-205ENST00000505583 NCOA6Q14686 2063 aaPredicted RBP5.55□□□□□ -1.52
GYPB-205ENST00000505583 LOC102723996A0A087X1L8 192 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 A0A0A6YYC8 382 aaPredicted RBP5.55□□□□□ -1.52
GYPB-205ENST00000505583 TRGV8A0A0C4DH27 118 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 TCRBV7S3A2A0A539 114 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 GOLGA6L9A6NEM1 432 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 ERI2A8K979 691 aaKnown RBP5.55□□□□□ -1.52
GYPB-205ENST00000505583 ARHGEF33A8MVX0 844 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 C19orf84I3L1E1 186 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 I3L1I5 382 aaPredicted RBP5.55□□□□□ -1.52
GYPB-205ENST00000505583 CCL21O00585 134 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 KDM1AO60341 852 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 MAN1A2O60476 641 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 MATN4O95460 622 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 RPN2P04844 631 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 SERPINA7P05543 415 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 APRTP07741 180 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 ERGP11308 486 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 VAMP1P23763 118 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 FMO4P31512 558 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 RPL22P35268 128 aaKnown RBP5.55□□□□□ -1.52
GYPB-205ENST00000505583 SLC26A3P40879 764 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 CARSP49589 748 aaKnown RBP5.55□□□□□ -1.52
GYPB-205ENST00000505583 ZNF75DP51815 510 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 EMP2P54851 167 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 EIF3BP55884 814 aaKnown RBP5.55□□□□□ -1.52
GYPB-205ENST00000505583 SESN2P58004 480 aaPredicted RBP5.55□□□□□ -1.52
GYPB-205ENST00000505583 KRTAP10-9P60411 292 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 ADORA2A-AS1P86434 159 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 ART3Q13508 389 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 GBX1Q14549 363 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 SIX1Q15475 284 aaPredicted RBP5.55□□□□□ -1.52
GYPB-205ENST00000505583 MUM1Q2TAK8 710 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 ACSBG2Q5FVE4 666 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 FCRLBQ6BAA4 426 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 ZNF425Q6IV72 752 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 PRMT9Q6P2P2 845 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 LRRC8BQ6P9F7 803 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 TMEM205Q6UW68 189 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 GFRALQ6UXV0 394 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 LANCL3Q6ZV70 420 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 NCCRP1Q6ZVX7 275 aaPredicted RBP5.55□□□□□ -1.52
GYPB-205ENST00000505583 OTOAQ7RTW8 1153 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 PRSS41Q7RTY9 318 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 MRGPRGQ86SM5 289 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 PAQR7Q86WK9 346 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 PLD3Q8IV08 490 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 ZC3H7AQ8IWR0 971 aaKnown RBP5.55□□□□□ -1.52
GYPB-205ENST00000505583 ZNF295-AS1Q8N0V1 137 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 CSNK1A1LQ8N752 337 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 PPHLN1Q8NEY8 458 aaKnown RBP5.55□□□□□ -1.52
GYPB-205ENST00000505583 COG1Q8WTW3 980 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 SKA2Q8WVK7 121 aaPredicted RBP5.55□□□□□ -1.52
GYPB-205ENST00000505583 HAS2Q92819 552 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 MFSD3Q96ES6 412 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 CABS1Q96KC9 395 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 IMMP1LQ96LU5 166 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 OR2A5Q96R48 311 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 PANX2Q96RD6 677 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 TTC1Q99614 292 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 SLC30A3Q99726 388 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 NPAS2Q99743 824 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 ZFYVE21Q9BQ24 234 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 MACROD1Q9BQ69 325 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 YIPF2Q9BWQ6 316 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 RAB11FIP5Q9BXF6 653 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 HES7Q9BYE0 225 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 IGSF5Q9NSI5 407 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 IL1RAPL1Q9NZN1 696 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 CRYL1Q9Y2S2 319 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 MED16Q9Y2X0 877 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 FAM169AQ9Y6X4 670 aa5.55□□□□□ -1.52
GYPB-205ENST00000505583 TRAV17A0A0B4J275 112 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 DYTNA2CJ06 578 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 A8MUI8 341 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 MIF4GDA9UHW6 222 aaKnown RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 E7EVH7 732 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 MYO1CO00159 1063 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 NDUFB5O43674 189 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 PSIP1O75475 530 aaKnown RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 NDUFS3O75489 264 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 ZNF189O75820 626 aaPredicted RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 USP1O94782 785 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 SEC24DO94855 1032 aaPredicted RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 VAPBO95292 243 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 FKBP9O95302 570 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 BMP10O95393 424 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 SLC16A8O95907 504 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 GAS8O95995 478 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 HEXBP07686 556 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 RPS3P23396 243 aaKnown RBP eCLIP5.54□□□□□ -1.521e-8■■■■■ 38.6
GYPB-205ENST00000505583 CXCR2P25025 360 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 MGAT1P26572 445 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 HTR1EP28566 365 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 CMPK1P30085 196 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 STIP1P31948 543 aaKnown RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 FDFT1P37268 417 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 CA7P43166 264 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 TTPAP49638 278 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms