RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 SULF2Q8IWU5 870 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 CHERPQ8IWX8 916 aaKnown RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 CARFQ8N187 725 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 CIARTQ8N365 385 aaPredicted RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 MFSD4AQ8N468 514 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 DNAJC22Q8N4W6 341 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 CPSF7Q8N684 471 aaKnown RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 TTC29Q8NA56 475 aaPredicted RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 KCT2Q8NC54 265 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 ANKRD20A12PQ8NF67 263 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 OR4K2Q8NGD2 314 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 OR2L2Q8NH16 312 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 FLVCR1-AS1Q8TAF5 88 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 LKAAEAR1Q8TD35 194 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 COG1Q8WTW3 980 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 DLG3Q92796 817 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 SLCO2A1Q92959 643 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 MIEF2Q96C03 454 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 IMP4Q96G21 291 aaKnown RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 RMND5BQ96G75 393 aaPredicted RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 DCUN1D1Q96GG9 259 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 OXNAD1Q96HP4 312 aaPredicted RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 SEC16BQ96JE7 1060 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 C10orf90Q96M02 699 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 ZNF830Q96NB3 372 aaPredicted RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 ALPK1Q96QP1 1244 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 DMRTA2Q96SC8 542 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 EIF3CQ99613 913 aaKnown RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 FOXC2Q99958 501 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 SELENOSQ9BQE4 189 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 SYT11Q9BT88 431 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 POLDIP3Q9BY77 421 aaKnown RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 THAP2Q9H0W7 228 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 ATG10Q9H0Y0 220 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 OR52A5Q9H2C5 316 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 CXXC4Q9H2H0 198 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 HAUS4Q9H6D7 363 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 ASB8Q9H765 288 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 C10orf88Q9H8K7 445 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 SYNPO2LQ9H987 977 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 MRM3Q9HC36 420 aaKnown RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 GLOD4Q9HC38 313 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 MAGEE1Q9HCI5 957 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 DMRT3Q9NQL9 472 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 ABCF3Q9NUQ8 709 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 PIH1D1Q9NWS0 290 aaKnown RBP3.44□□□□□ -1.86
USP46-205ENST00000504078 COQ3Q9NZJ6 369 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 SLAMF8Q9P0V8 285 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 ADAM21Q9UKJ8 722 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 PLCL2Q9UPR0 1127 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 RNF6Q9Y252 685 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 ASF1AQ9Y294 204 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 PKP3Q9Y446 797 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 HEBP2Q9Y5Z4 205 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 AP1M2Q9Y6Q5 423 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 SCINQ9Y6U3 715 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 COLEC10Q9Y6Z7 277 aa3.44□□□□□ -1.86
USP46-205ENST00000504078 TACC2O95359 2948 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 VPS13CQ709C8 3753 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 HCFC1P51610 2035 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 LOC105369274A0A096LPK9 316 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 A0A0A6YYK5 440 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 LOC102723532A0A0G2JNH3 316 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 A0A1B0GTH9 108 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 FAM237BA0A1B0GVD1 139 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 LRRD1A4D1F6 860 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 OR51F1A6NGY5 319 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 GABRR3A8MPY1 467 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 IDSB3KWA1 339 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 G3V3Y1 287 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 H7C1Q1 480 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 TFECO14948 347 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 STX7O15400 261 aaKnown RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 TTI1O43156 1089 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 PROM1O43490 865 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 CTSVO60911 334 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 CDC123O75794 336 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 FAM155BO75949 473 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 PDE9AO76083 593 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 SRP72O76094 671 aaKnown RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 TOXO94900 526 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 LY6G6DO95868 133 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 SERPINA7P05543 415 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 HEXAP06865 529 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 HEXBP07686 556 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 TPM2P07951 284 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 ZGLP1P0C6A0 271 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 MSL3P1P0C860 447 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 ERVK-10P10266 1014 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 PECAM1P16284 738 aaPredicted RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 FERP16591 822 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 ZNF24P17028 368 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 IGFBP2P18065 325 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 AGAP20933 346 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 DNASE1P24855 282 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 CCNCP24863 283 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 PTPN3P26045 913 aa3.43□□□□□ -1.86
USP46-205ENST00000504078 EEF1GP26641 437 aaKnown RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 EEF1DP29692 281 aaKnown RBP3.43□□□□□ -1.86
USP46-205ENST00000504078 PKLRP30613 574 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms