RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SUPT3HB4E1H0 165 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 HAT1O14929 419 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 RAD1O60671 282 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 CPNE3O75131 537 aaKnown RBP24.04■■□□□ 1.44
LSM6-202ENST00000502781 SUPT3HO75486 399 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 STK16O75716 305 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 CDH1P12830 882 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 TCTE1Q5JU00 501 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 NLGN4XQ8N0W4 816 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 NLGN4YQ8NFZ3 816 aaPredicted RBP24.04■■□□□ 1.44
LSM6-202ENST00000502781 SLC5A11Q8WWX8 675 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 NAF1Q96HR8 494 aaKnown RBP24.04■■□□□ 1.44
LSM6-202ENST00000502781 SELENOSQ9BQE4 189 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 SARGQ9BW04 601 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 KCNE2Q9Y6J6 123 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 AP1M2Q9Y6Q5 423 aa24.04■■□□□ 1.44
LSM6-202ENST00000502781 LOC105369274A0A096LPK9 316 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 LOC102723532A0A0G2JNH3 316 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 FITM1A5D6W6 292 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 CCDC151A5D8V7 595 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 SMIM23A6NLE4 172 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 ZSCAN9O15535 394 aaPredicted RBP24.03■■□□□ 1.44
LSM6-202ENST00000502781 RRP8O43159 456 aaKnown RBP24.03■■□□□ 1.44
LSM6-202ENST00000502781 ZNF749O43361 778 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 WDR47O94967 919 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 MT-ND3P03897 115 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 S100BP04271 92 aaPredicted RBP24.03■■□□□ 1.44
LSM6-202ENST00000502781 NTRK1P04629 796 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 HSPA7P48741 367 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 FBXO48Q5FWF7 155 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 C6orf15Q6UXA7 325 aaPredicted RBP24.03■■□□□ 1.44
LSM6-202ENST00000502781 ADCK2Q7Z695 626 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 SPACA3Q8IXA5 215 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 OR4N4Q8N0Y3 316 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 ESX1Q8N693 406 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 ESAMQ96AP7 390 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 MRPL57Q9BQC6 102 aaKnown RBP24.03■■□□□ 1.44
LSM6-202ENST00000502781 CD244Q9BZW8 370 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 ACTR5Q9H9F9 607 aaPredicted RBP24.03■■□□□ 1.44
LSM6-202ENST00000502781 XPR1Q9UBH6 696 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 LGALS13Q9UHV8 139 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 PLAAQ9Y263 795 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 ASB1Q9Y576 335 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 KCNE1BA0A087WTH5 132 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 TEX51A0A1B0GUA7 166 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 SRRM3A6NNA2 597 aaPredicted RBP24.03■■□□□ 1.44
LSM6-202ENST00000502781 SBK3P0C264 359 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 PYGBP11216 843 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 RORAP35398 523 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 SETDB1Q15047 1291 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 CATSPEREQ5SY80 951 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 ZNF517Q6ZMY9 492 aaPredicted RBP24.03■■□□□ 1.44
LSM6-202ENST00000502781 PLD3Q8IV08 490 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 CACNA2D3Q8IZS8 1091 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 GALNT6Q8NCL4 622 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 RNF31Q96EP0 1072 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 TSNARE1Q96NA8 513 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 MRPL46Q9H2W6 279 aaKnown RBP24.03■■□□□ 1.44
LSM6-202ENST00000502781 PELI2Q9HAT8 420 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 DNAJC11Q9NVH1 559 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 GPRC5BQ9NZH0 403 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 DYRK1BQ9Y463 629 aa24.03■■□□□ 1.44
LSM6-202ENST00000502781 FOXO6A8MYZ6 492 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 H0YGG7 62 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 GOLGA8RI6L899 631 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 GSTA1P08263 222 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 KRT15P19012 456 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 CCR8P51685 355 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 VSX2P58304 361 aaPredicted RBP24.02■■□□□ 1.44
LSM6-202ENST00000502781 ARF3P61204 181 aaPredicted RBP24.02■■□□□ 1.44
LSM6-202ENST00000502781 IFFO1Q0D2I5 559 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 ABHD18Q0P651 414 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 GPS2Q13227 327 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 ST3GAL2Q16842 350 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 RHBDD2Q6NTF9 364 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 LRRC70Q7Z2Q7 622 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 IQCKQ8N0W5 287 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 ZNF655Q8N720 491 aaPredicted RBP24.02■■□□□ 1.44
LSM6-202ENST00000502781 THAP11Q96EK4 314 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 DCBLD2Q96PD2 775 aa24.02■■□□□ 1.44
LSM6-202ENST00000502781 TK2O00142 265 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 KLK10O43240 276 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 CTIFO43310 598 aaKnown RBP24.01■■□□□ 1.43
LSM6-202ENST00000502781 HBQ1P09105 142 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 GNAZP19086 355 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 EPORP19235 508 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 AGTR2P50052 363 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 ATP1A2P50993 1020 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 ALDH18A1P54886 795 aaKnown RBP24.01■■□□□ 1.43
LSM6-202ENST00000502781 RPS15AP62244 130 aaKnown RBP24.01■■□□□ 1.43
LSM6-202ENST00000502781 TLE3Q04726 772 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 CDC16Q13042 620 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 PRTGQ2VWP7 1150 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 WASHC2DQ5SRD0 308 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 ZNF385CQ66K41 422 aaPredicted RBP24.01■■□□□ 1.43
LSM6-202ENST00000502781 NXPE4Q6UWF7 544 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 SLCO4C1Q6ZQN7 724 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 CAPS2Q9BXY5 557 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 LHX9Q9NQ69 397 aa24.01■■□□□ 1.43
LSM6-202ENST00000502781 TMEM216Q9P0N5 145 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms