RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ZSWIM9Q86XI8 627 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 XAGE5Q8WWM1 108 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 JPH3Q8WXH2 748 aaPredicted RBP16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 TMEM203Q969S6 136 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 CEP295NLQ96MC4 621 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 GTPBP2Q9BX10 602 aaKnown RBP16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 MROQ9BYG7 248 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 SLC32A1Q9H598 525 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 IGSF5Q9NSI5 407 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 CXCL14O95715 111 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 GANABQ14697 944 aaKnown RBP16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 DESI1Q6ICB0 168 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 ADNP2Q6IQ32 1131 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 SLC2A13Q96QE2 648 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 FAM83DQ9H4H8 585 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 HCN4Q9Y3Q4 1203 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 AKAP11Q9UKA4 1901 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 J3KR12 359 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 RLN1P04808 185 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 HTR2BP41595 481 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 AGTR2P50052 363 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 ENPP6Q6UWR7 440 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 LYSMD3Q7Z3D4 306 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 GALNT6Q8NCL4 622 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 MGLLQ99685 303 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 DPAGT1Q9H3H5 408 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 MS4A12Q9NXJ0 267 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 VPS29Q9UBQ0 182 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 INMT-MINDY4F8WBC2 141 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 ACSL4O60488 711 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 EPOP01588 193 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 CD52P31358 61 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 PON2Q15165 354 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 FNDC3BQ53EP0 1204 aaKnown RBP16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 LARP4Q71RC2 724 aaKnown RBP eCLIP16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 FAM220AQ7Z4H9 259 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 CIR1Q86X95 450 aaPredicted RBP16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 PAPD5Q8NDF8 572 aaKnown RBP16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 FAM46DQ8NEK8 389 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 LILRB4Q8NHJ6 448 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 GPR152Q8TDT2 470 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 POF1BQ8WVV4 589 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 TPT1P8Q9HAU6 139 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 RDH8Q9NYR8 311 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 UBR2Q8IWV8 1755 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 SEPT4O43236 478 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 HCRTO43612 131 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 NSG1P42857 185 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 SPCS2Q15005 226 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 ZNF767PQ75MW2 155 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 ISCA2Q86U28 154 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 SCAMP5Q8TAC9 235 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 BARD1Q99728 777 aaKnown RBP16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 GSTO2Q9H4Y5 243 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 PCDHGA4Q9Y5G9 962 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 GRXCR2A6NFK2 248 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 UNCXA6NJT0 531 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 LOC730098B7Z3J9 87 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 PLD2O14939 933 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 FUCA1P04066 466 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 SCAPQ12770 1279 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 ASB18Q6ZVZ8 466 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 SPRED1Q7Z699 444 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 PHC2Q8IXK0 858 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 ART5Q96L15 291 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 MRGPRX2Q96LB1 330 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 ERVK13-1Q9NX77 482 aa16.75■□□□□ 0.27
HMGXB3-201ENST00000502717 AGAP5A6NIR3 686 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 MID1O15344 667 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 AP1S1P61966 158 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 SHQ1Q6PI26 577 aaKnown RBP16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 RHOXF1Q8NHV9 184 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 UCK2Q9BZX2 261 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 PCDHGA8Q9Y5G5 932 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 NAV1Q8NEY1 1877 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 SMPD1P17405 629 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 DCTP40126 519 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 MAP2K3P46734 347 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 MAZP56270 477 aaKnown RBP16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 KCNJ9Q92806 393 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 TEPSINQ96N21 525 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 OSGEPL1Q9H4B0 414 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 PLOD2O00469 737 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 AKAP8O43823 692 aaKnown RBP16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 HLA-DPB1P04440 258 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 OMPP47874 163 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 RAPSNQ13702 412 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 CYBRD1Q53TN4 286 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 FRG2Q64ET8 278 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 LRRC70Q7Z2Q7 622 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 OR6K2Q8NGY2 324 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 AKAP1Q92667 903 aaKnown RBP eCLIP16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 RIPOR3Q96MK2 946 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 FRG2BQ96QU4 278 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 MED11Q9P086 117 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 COL2A1P02458 1487 aaPredicted RBP16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 TUBGCP6Q96RT7 1819 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 OPN1SWP03999 348 aa16.74■□□□□ 0.27
HMGXB3-201ENST00000502717 SRPRAP08240 638 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms