RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 GPR87Q9BY21 358 aa10.28□□□□□ -0.76
UBE2D3-212ENST00000502563 ROPN1BQ9BZX4 212 aaPredicted RBP10.28□□□□□ -0.76
UBE2D3-212ENST00000502563 ROPN1Q9HAT0 212 aaPredicted RBP10.28□□□□□ -0.76
UBE2D3-212ENST00000502563 PELI2Q9HAT8 420 aa10.28□□□□□ -0.76
UBE2D3-212ENST00000502563 LHX9Q9NQ69 397 aa10.28□□□□□ -0.76
UBE2D3-212ENST00000502563 KCND3Q9UK17 655 aa10.28□□□□□ -0.76
UBE2D3-212ENST00000502563 PADI1Q9ULC6 663 aa10.28□□□□□ -0.76
UBE2D3-212ENST00000502563 RNF112Q9ULX5 631 aa10.28□□□□□ -0.76
UBE2D3-212ENST00000502563 LAMA5O15230 3695 aa10.28□□□□□ -0.76
UBE2D3-212ENST00000502563 SEC16AO15027 2179 aa10.28□□□□□ -0.76
UBE2D3-212ENST00000502563 TRIM49D1C9J1S8 452 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 POC1B-GALNT4F8VUJ3 575 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 K7ENP7 123 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 RFPL1O75677 317 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 TIAF1O95411 115 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 GUCA1CO95843 209 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 KLK3P07288 261 aaPredicted RBP10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 CCNYL3P0C7X3 344 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 ZNF28P17035 718 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 CXCR2P25025 360 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 GRK3P35626 688 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 AHRP35869 848 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 HSD17B3P37058 310 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 CASP2P42575 452 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 FAM53BQ14153 422 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 NAA30Q147X3 362 aaPredicted RBP10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 TBCCQ15814 346 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 PRTGQ2VWP7 1150 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 TECRLQ5HYJ1 363 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 THEMIS2Q5TEJ8 643 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 NIPAL1Q6NVV3 410 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 PRMT9Q6P2P2 845 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 FBXO42Q6P3S6 717 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 INO80CQ6PI98 192 aaPredicted RBP10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 MBOAT1Q6ZNC8 495 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 LRRC70Q7Z2Q7 622 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 TAX1BP1Q86VP1 789 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 ZFAND4Q86XD8 727 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 GSPT2Q8IYD1 628 aaKnown RBP10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 CACNA2D3Q8IZS8 1091 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 ARHGEF39Q8N4T4 335 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 ZNF655Q8N720 491 aaPredicted RBP10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 PPFIBP2Q8ND30 876 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 TTLQ8NG68 377 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 UBLCP1Q8WVY7 318 aaPredicted RBP10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 NXNL1Q96CM4 212 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 SLC45A3Q96JT2 553 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 PKNOX2Q96KN3 472 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 CTRCQ99895 268 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 EGFL8Q99944 293 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 SELENOSQ9BQE4 189 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 ACAT2Q9BWD1 397 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 C1QTNF3Q9BXJ4 246 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 PARD6BQ9BYG5 372 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 ATG10Q9H0Y0 220 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 SLC26A1Q9H2B4 701 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 NT5DC2Q9H857 520 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 ACTR5Q9H9F9 607 aaPredicted RBP10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 PCMTD2Q9NV79 361 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 CIDEBQ9UHD4 219 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 TSR3Q9UJK0 312 aaKnown RBP10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 TNPO3Q9Y5L0 923 aaKnown RBP10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 PTPRQQ9UMZ3 2332 aa10.27□□□□□ -0.77
UBE2D3-212ENST00000502563 PKD1L2Q7Z442 2459 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 A0A1B0GX78 115 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 TRBC2A0A5B9 178 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 STX16-NPEPL1H3BU86 382 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 MEN1O00255 615 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 STX16O14662 325 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 MAP2K7O14733 419 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 KLK10O43240 276 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 ZNF749O43361 778 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 HCRTR1O43613 425 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 UGDHO60701 494 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 STK16O75716 305 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 ALBP02768 609 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 CYC1P08574 325 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 KCNC1P48547 511 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 PIK3CGP48736 1102 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 CCR8P51685 355 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 ALDH18A1P54886 795 aaKnown RBP10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 NAA20P61599 178 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 CSNK1G2P78368 415 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 NFKB2Q00653 900 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 MC1RQ01726 317 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 PWP1Q13610 501 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 SETDB1Q15047 1291 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 PCBP2Q15366 365 aaKnown RBP eCLIP10.26□□□□□ -0.772e-12■■■■□ 20.7
UBE2D3-212ENST00000502563 MUM1Q2TAK8 710 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 ATG9BQ674R7 924 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 SH2D5Q6ZV89 423 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 CROCCP2Q86T23 111 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 THOC6Q86W42 341 aaKnown RBP10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 C2orf73Q8N5S3 287 aaPredicted RBP10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 TBC1D19Q8N5T2 526 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 IL22RA1Q8N6P7 574 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 TTC29Q8NA56 475 aaPredicted RBP10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 SLC38A9Q8NBW4 561 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 KCTD4Q8WVF5 259 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 SLC5A11Q8WWX8 675 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms