RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 CD244Q9BZW8 370 aa17.07■□□□□ 0.32
CCHCR1-216ENST00000502557 ROPN1BQ9BZX4 212 aaPredicted RBP17.07■□□□□ 0.32
CCHCR1-216ENST00000502557 CNOT10Q9H9A5 744 aaKnown RBP17.07■□□□□ 0.32
CCHCR1-216ENST00000502557 ROPN1Q9HAT0 212 aaPredicted RBP17.07■□□□□ 0.32
CCHCR1-216ENST00000502557 ENAMQ9NRM1 1142 aa17.07■□□□□ 0.32
CCHCR1-216ENST00000502557 DNAJC11Q9NVH1 559 aa17.07■□□□□ 0.32
CCHCR1-216ENST00000502557 XPR1Q9UBH6 696 aa17.07■□□□□ 0.32
CCHCR1-216ENST00000502557 ASB1Q9Y576 335 aa17.07■□□□□ 0.32
CCHCR1-216ENST00000502557 KCNE2Q9Y6J6 123 aa17.07■□□□□ 0.32
CCHCR1-216ENST00000502557 CEP295Q9C0D2 2601 aa17.07■□□□□ 0.32
CCHCR1-216ENST00000502557 A0A087WV48 116 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 ZSCAN9O15535 394 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 RRP8O43159 456 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 SRPX2O60687 465 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 SBK3P0C264 359 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 CCR8P51685 355 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 CATSPEREQ5SY80 951 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 TLDC1Q6P9B6 456 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 SPACA3Q8IXA5 215 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 CACNA2D3Q8IZS8 1091 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 RIBC1Q8N443 379 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 TMEM151AQ8N4L1 468 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 ZNF655Q8N720 491 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 OR4K1Q8NGD4 311 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 MRPL57Q9BQC6 102 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 TMEM109Q9BVC6 243 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 DPH1Q9BZG8 443 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 MRPL46Q9H2W6 279 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 ACTR5Q9H9F9 607 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 PELI2Q9HAT8 420 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 STARD5Q9NSY2 213 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 IRAK4Q9NWZ3 460 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 TMEM216Q9P0N5 145 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 CPSF2Q9P2I0 782 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 LGALS13Q9UHV8 139 aa17.06■□□□□ 0.32
CCHCR1-216ENST00000502557 CCDC151A5D8V7 595 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 SRRM3A6NNA2 597 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 H0YGG7 62 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 TK2O00142 265 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 KLK10O43240 276 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 CCNT2O60583 730 aaKnown RBP17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 ERLIN1O75477 346 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 GFAPP14136 432 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 GCGRP47871 477 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 ATP1A2P50993 1020 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 ALDH18A1P54886 795 aaKnown RBP17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 ARF3P61204 181 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 MEF2AQ02078 507 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 CDC16Q13042 620 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 GPS2Q13227 327 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 COL9A2Q14055 689 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 SETDB1Q15047 1291 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 ST3GAL2Q16842 350 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 PFKFB4Q16877 469 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 TCTE1Q5JU00 501 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 WASHC2DQ5SRD0 308 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 NXPE4Q6UWF7 544 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 LRRC70Q7Z2Q7 622 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 LCA5Q86VQ0 697 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 ESX1Q8N693 406 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 SPNS1Q9H2V7 528 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 AP1M2Q9Y6Q5 423 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 ADAMTS20P59510 1910 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 KIF26BQ2KJY2 2108 aa17.05■□□□□ 0.32
CCHCR1-216ENST00000502557 FEZF1A0PJY2 475 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 FITM1A5D6W6 292 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 LRRC14BA6NHZ5 514 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 CTIFO43310 598 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 LCMT2O60294 686 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 EIF2S1P05198 315 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 GSTA1P08263 222 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 EPORP19235 508 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 ITPKBP27987 946 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 RORAP35398 523 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 BCL6P41182 706 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 RPS15AP62244 130 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 ZNF844Q08AG5 666 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 PDK4Q16654 411 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 RHBDD2Q6NTF9 364 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 C16orf46Q6P387 395 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 LRRC69Q6ZNQ3 347 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 SLCO4C1Q6ZQN7 724 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 TMPRSS11BQ86T26 416 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 IQCKQ8N0W5 287 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 PTGR2Q8N8N7 351 aaPredicted RBP17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 SNX31Q8N9S9 440 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 CLIP3Q96DZ5 547 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 THAP11Q96EK4 314 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 LRFN5Q96NI6 719 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 CAPS2Q9BXY5 557 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 AKIRIN1Q9H9L7 192 aaPredicted RBP17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 GPRC5BQ9NZH0 403 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 SRPK3Q9UPE1 567 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 SSUH2Q9Y2M2 353 aa17.04■□□□□ 0.32
CCHCR1-216ENST00000502557 KCNE1BA0A087WTH5 132 aa17.03■□□□□ 0.32
CCHCR1-216ENST00000502557 K7EPI3 171 aa17.03■□□□□ 0.32
CCHCR1-216ENST00000502557 PRAMEF4O60810 478 aa17.03■□□□□ 0.32
CCHCR1-216ENST00000502557 HBQ1P09105 142 aa17.03■□□□□ 0.32
CCHCR1-216ENST00000502557 C1GALT1C1LP0DN25 315 aa17.03■□□□□ 0.32
CCHCR1-216ENST00000502557 GNAZP19086 355 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms