RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 Q6ZSR9 355 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 C19orf60Q96EN9 201 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 FAR2Q96K12 515 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 DPH7Q9BTV6 452 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 SLC29A3Q9BZD2 475 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 KLHL25Q9H0H3 589 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 ABCG4Q9H172 646 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 MRPS30Q9NP92 439 aaKnown RBP23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 FEZF1A0PJY2 475 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 H0YIV9 168 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 SLC34A2O95436 690 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 PDYNP01213 254 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 PROS1P07225 676 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 PVRP15151 417 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 TGM1P22735 817 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 ALDH4A1P30038 563 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 HMOX2P30519 316 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 GRIA3P42263 894 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 CAPZBP47756 277 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 BIRC2Q13490 618 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 PROX2Q3B8N5 592 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 PERM1Q5SV97 790 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 ZNF425Q6IV72 752 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 SPESP1Q6UW49 350 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 VN1R5Q7Z5H4 357 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 OR7G3Q8NG95 312 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 CCDC74AQ96AQ1 378 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 PELI2Q9HAT8 420 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 OTOGLQ3ZCN5 2332 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 C2orf74A8MZ97 194 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 LCMT2O60294 686 aaKnown RBP23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 ALPPL2P10696 532 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 HNF4AP41235 474 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 NBL1P41271 181 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 FRG2Q64ET8 278 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 ALYREFQ86V81 257 aaKnown RBP23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 OOSP2Q86WS3 158 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 DDIASQ8IXT1 998 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 Q8N9G6 341 aaPredicted RBP23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 ANKRD53Q8N9V6 530 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 FRG2BQ96QU4 278 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 EFCAB11Q9BUY7 163 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 POMT2Q9UKY4 750 aa23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 GOLGA4Q13439 2230 aaKnown RBP23.3■■□□□ 1.32
TNFRSF4-203ENST00000497869 IGHV1OR21-1A0A087WYE8 117 aa23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 ZNF883P0CG24 379 aa23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 MAGP20916 626 aa23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 CCR8P51685 355 aa23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 ATXN3P54252 364 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 GFERP55789 205 aa23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 ABATP80404 500 aa23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 REEP5Q00765 189 aa23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 NR0B2Q15466 257 aa23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 ZIC1Q15915 447 aa23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 FCRL6Q6DN72 434 aa23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 LAS2Q8IYD9 372 aa23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 SEMA4GQ9NTN9 838 aa23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 ENTPD2Q9Y5L3 495 aa23.29■■□□□ 1.32
TNFRSF4-203ENST00000497869 HAT1O14929 419 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 ULK1O75385 1050 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 TBX6O95947 436 aaPredicted RBP23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 AMD1P17707 334 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 CMPK1P30085 196 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 HMGCS1Q01581 520 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 LSM12Q3MHD2 195 aaKnown RBP23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 PAQR7Q86WK9 346 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 SLC22A18Q96BI1 424 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 MTERF1Q99551 399 aaKnown RBP23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 SIKE1Q9BRV8 207 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 ACPTQ9BZG2 426 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 AKTIPQ9H8T0 292 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 ARL2BPQ9Y2Y0 163 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 EME2A4GXA9 379 aaPredicted RBP23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 KIF1CO43896 1103 aaKnown RBP23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 ETHE1O95571 254 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 CD1CP29017 333 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 CSF2RBP32927 897 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 EPHA4P54764 986 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 SLC5A12Q1EHB4 618 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 TMEM198Q66K66 360 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 MED27Q6P2C8 311 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 LARP4Q71RC2 724 aaKnown RBP eCLIP23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 TRIM46Q7Z4K8 759 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 HUS1BQ8NHY5 278 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 FCRL4Q96PJ5 515 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 ELOVL6Q9H5J4 265 aa23.28■■□□□ 1.32
TNFRSF4-203ENST00000497869 ASXL3Q9C0F0 2248 aa23.27■■□□□ 1.32
TNFRSF4-203ENST00000497869 SNRNP200O75643 2136 aaKnown RBP23.27■■□□□ 1.32
TNFRSF4-203ENST00000497869 CPED1A4D0V7 1026 aa23.27■■□□□ 1.32
TNFRSF4-203ENST00000497869 TRPC5OSA6NMA1 111 aa23.27■■□□□ 1.32
TNFRSF4-203ENST00000497869 TNFSF14O43557 240 aa23.27■■□□□ 1.32
TNFRSF4-203ENST00000497869 TMIGD1Q6UXZ0 262 aa23.27■■□□□ 1.32
TNFRSF4-203ENST00000497869 RNF165Q6ZSG1 346 aa23.27■■□□□ 1.32
TNFRSF4-203ENST00000497869 ADCK2Q7Z695 626 aa23.27■■□□□ 1.32
TNFRSF4-203ENST00000497869 SPRED1Q7Z699 444 aa23.27■■□□□ 1.32
TNFRSF4-203ENST00000497869 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.27■■□□□ 1.32
TNFRSF4-203ENST00000497869 KIRREL3Q8IZU9 778 aa23.27■■□□□ 1.32
TNFRSF4-203ENST00000497869 AFAP1L2Q8N4X5 818 aa23.27■■□□□ 1.32
TNFRSF4-203ENST00000497869 CCDC197Q8NCU1 140 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms