RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 NADK2Q4G0N4 442 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 FAM45BPQ6NSW5 357 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 JMJD6Q6NYC1 403 aaPredicted RBP23.09■■□□□ 1.29
HLA-C-209ENST00000495835 CSNK1A1LQ8N752 337 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 BBOF1Q8ND07 529 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 FAM45AQ8TCE6 357 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 STT3BQ8TCJ2 826 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 TM9SF4Q92544 642 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 MIEF2Q96C03 454 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 THAP11Q96EK4 314 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 PDLIM5Q96HC4 596 aaKnown RBP23.09■■□□□ 1.29
HLA-C-209ENST00000495835 HIST1H2AHQ96KK5 128 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 HIST1H2AJQ99878 128 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 H2AFJQ9BTM1 129 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 FAM129AQ9BZQ8 928 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 ZNF552Q9H707 407 aaPredicted RBP23.09■■□□□ 1.29
HLA-C-209ENST00000495835 CTSFQ9UBX1 484 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 PYCARDQ9ULZ3 195 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 CHMP2BQ9UQN3 213 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 VWA7Q9Y334 891 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 HS3ST3B1Q9Y662 390 aa23.09■■□□□ 1.29
HLA-C-209ENST00000495835 EFCAB8A8MWE9 144 aa23.08■■□□□ 1.29
HLA-C-209ENST00000495835 E7ESA3 106 aa23.08■■□□□ 1.29
HLA-C-209ENST00000495835 SOCS6O14544 535 aa23.08■■□□□ 1.29
HLA-C-209ENST00000495835 MED26O95402 600 aa23.08■■□□□ 1.29
HLA-C-209ENST00000495835 ZGLP1P0C6A0 271 aa23.08■■□□□ 1.29
HLA-C-209ENST00000495835 CDKN2DP55273 166 aa23.08■■□□□ 1.29
HLA-C-209ENST00000495835 AP1S2P56377 157 aa23.08■■□□□ 1.29
HLA-C-209ENST00000495835 PDAP1Q13442 181 aaKnown RBP23.08■■□□□ 1.29
HLA-C-209ENST00000495835 DSG2Q14126 1118 aa23.08■■□□□ 1.29
HLA-C-209ENST00000495835 RBM20Q5T481 1227 aaKnown RBP23.08■■□□□ 1.29
HLA-C-209ENST00000495835 EFCAB3Q8N7B9 438 aa23.08■■□□□ 1.29
HLA-C-209ENST00000495835 ADAMTS6Q9UKP5 1117 aa23.08■■□□□ 1.29
HLA-C-209ENST00000495835 RUVBL1Q9Y265 456 aaKnown RBP23.08■■□□□ 1.29
HLA-C-209ENST00000495835 MAU2Q9Y6X3 613 aa23.08■■□□□ 1.29
HLA-C-209ENST00000495835 RELNP78509 3460 aa23.08■■□□□ 1.29
HLA-C-209ENST00000495835 ATXN8OSP0DMR3 200 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 FBLP22087 321 aaKnown RBP23.07■■□□□ 1.28
HLA-C-209ENST00000495835 RPS15AP62244 130 aaKnown RBP23.07■■□□□ 1.28
HLA-C-209ENST00000495835 TBPL1P62380 186 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 RBBP7Q16576 425 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 NDUFA9Q16795 377 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 TUBB8Q3ZCM7 444 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 PRAMEF13Q5VWM6 474 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 AGTRAPQ6RW13 159 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 KIRREL2Q6UWL6 708 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 ADCK2Q7Z695 626 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 ARHGEF39Q8N4T4 335 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 RBMXL3Q8N7X1 1067 aaKnown RBP23.07■■□□□ 1.28
HLA-C-209ENST00000495835 GALNT11Q8NCW6 608 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 CPT1CQ8TCG5 803 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 LINGO1Q96FE5 620 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 CFAP36Q96G28 342 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 TRIM51Q9BSJ1 452 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 TRIM54Q9BYV2 358 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 TGIF2Q9GZN2 237 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 SOX17Q9H6I2 414 aaPredicted RBP23.07■■□□□ 1.28
HLA-C-209ENST00000495835 C14orf105Q9NVL8 296 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 PLAAQ9Y263 795 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 MAP4K5Q9Y4K4 846 aa23.07■■□□□ 1.28
HLA-C-209ENST00000495835 PABPN1LA6NDY0 278 aaKnown RBP23.06■■□□□ 1.28
HLA-C-209ENST00000495835 H7BY64 318 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 TP73O15350 636 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 TSPAN12O95859 305 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 ENO2P09104 434 aaPredicted RBP23.06■■□□□ 1.28
HLA-C-209ENST00000495835 FDXRP22570 491 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 SLC26A3P40879 764 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 FOXL2P58012 376 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 KLC1Q07866 573 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 HKDC1Q2TB90 917 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 COLEC12Q5KU26 742 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 HECTD2Q5U5R9 776 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 LCTLQ6UWM7 567 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 MAATS1Q7Z4T9 603 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 SLC26A11Q86WA9 606 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 METTL27Q8N6F8 245 aaPredicted RBP23.06■■□□□ 1.28
HLA-C-209ENST00000495835 ANKRD7Q92527 254 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 PRAP1Q96NZ9 151 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 CRB3Q9BUF7 120 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 SGPP1Q9BX95 441 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 DRC3Q9H069 523 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 MKKSQ9NPJ1 570 aaPredicted RBP23.06■■□□□ 1.28
HLA-C-209ENST00000495835 SLAMF7Q9NQ25 335 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 CUEDC1Q9NWM3 386 aaPredicted RBP23.06■■□□□ 1.28
HLA-C-209ENST00000495835 NSMCE4AQ9NXX6 385 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 MOCS1Q9NZB8 636 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 ZFATQ9P243 1243 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 FBXL4Q9UKA2 621 aa23.06■■□□□ 1.28
HLA-C-209ENST00000495835 HAT1O14929 419 aa23.05■■□□□ 1.28
HLA-C-209ENST00000495835 VPS4BO75351 444 aa23.05■■□□□ 1.28
HLA-C-209ENST00000495835 MGAT5Q09328 741 aa23.05■■□□□ 1.28
HLA-C-209ENST00000495835 DUPD1Q68J44 220 aa23.05■■□□□ 1.28
HLA-C-209ENST00000495835 SLC6A19Q695T7 634 aa23.05■■□□□ 1.28
HLA-C-209ENST00000495835 TRMT10BQ6PF06 316 aaKnown RBP23.05■■□□□ 1.28
HLA-C-209ENST00000495835 C17orf64Q86WR6 236 aa23.05■■□□□ 1.28
HLA-C-209ENST00000495835 GPATCH11Q8N954 259 aa23.05■■□□□ 1.28
HLA-C-209ENST00000495835 ATL1Q8WXF7 558 aa23.05■■□□□ 1.28
HLA-C-209ENST00000495835 PWWP2AQ96N64 755 aa23.05■■□□□ 1.28
HLA-C-209ENST00000495835 KRT12Q99456 494 aa23.05■■□□□ 1.28
HLA-C-209ENST00000495835 WDR83Q9BRX9 315 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms