RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 LSMEM2Q8N112 164 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 Q8N9G6 341 aaPredicted RBP13.03□□□□□ -0.32
APTX-231ENST00000494973 OR4K1Q8NGD4 311 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 OR4D9Q8NGE8 314 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 OR52B6Q8NGF0 335 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 METTL6Q8TCB7 284 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 STON2Q8WXE9 905 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 TCTN2Q96GX1 697 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 GFM1Q96RP9 751 aaKnown RBP13.03□□□□□ -0.32
APTX-231ENST00000494973 SORT1Q99523 831 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 PLCD4Q9BRC7 762 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 DPH7Q9BTV6 452 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 SARGQ9BW04 601 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 TRIM55Q9BYV6 548 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 ABCG4Q9H172 646 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 NMRK1Q9NWW6 199 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 TRAF6Q9Y4K3 522 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 ASCC3Q8N3C0 2202 aaKnown RBP13.03□□□□□ -0.32
APTX-231ENST00000494973 OR2A25A4D2G3 310 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 GMNCA6NCL1 334 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 B4GAT1O43505 415 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 SHOX2O60902 331 aaPredicted RBP13.02□□□□□ -0.33
APTX-231ENST00000494973 CBFA2T3O75081 653 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 RFPL3O75679 317 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 OR4F21O95013 312 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 ZBTB11O95625 1053 aaPredicted RBP13.02□□□□□ -0.33
APTX-231ENST00000494973 EPORP19235 508 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 CSRP1P21291 193 aaKnown RBP13.02□□□□□ -0.33
APTX-231ENST00000494973 PSMB5P28074 263 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 CD1CP29017 333 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 GRIA3P42263 894 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 ARL4DP49703 201 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 ACADVLP49748 655 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 ERVPABLB-1P60509 514 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 CSNK1G2P78368 415 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 SLBPQ14493 270 aaKnown RBP eCLIP13.02□□□□□ -0.33
APTX-231ENST00000494973 PERM1Q5SV97 790 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 TMTC4Q5T4D3 741 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 FRG2Q64ET8 278 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 LETMD1Q6P1Q0 360 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 TMIGD1Q6UXZ0 262 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 FAM47EQ6ZV65 393 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 ASCL5Q7RTU5 278 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 PIP4P1Q86T03 277 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 FAM129CQ86XR2 697 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 ZNF655Q8N720 491 aaPredicted RBP13.02□□□□□ -0.33
APTX-231ENST00000494973 CDYL2Q8N8U2 506 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 GBP7Q8N8V2 638 aaPredicted RBP13.02□□□□□ -0.33
APTX-231ENST00000494973 C19orf47Q8N9M1 422 aaKnown RBP13.02□□□□□ -0.33
APTX-231ENST00000494973 FLVCR1-AS1Q8TAF5 88 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 TGM7Q96PF1 710 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 ZNF317Q96PQ6 595 aaPredicted RBP13.02□□□□□ -0.33
APTX-231ENST00000494973 FRG2BQ96QU4 278 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 CENPKQ9BS16 269 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 SLC6A20Q9NP91 592 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 RXFP3Q9NSD7 469 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 GEMIN8Q9NWZ8 242 aaKnown RBP13.02□□□□□ -0.33
APTX-231ENST00000494973 PPT2Q9UMR5 302 aa13.02□□□□□ -0.33
APTX-231ENST00000494973 EP300Q09472 2414 aaPredicted RBP13.01□□□□□ -0.33
APTX-231ENST00000494973 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.01□□□□□ -0.33
APTX-231ENST00000494973 H7BY64 318 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 TXNDC9O14530 226 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 UBFD1O14562 309 aaKnown RBP13.01□□□□□ -0.33
APTX-231ENST00000494973 HDAC3O15379 428 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 ITM2AO43736 263 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 GFRA3O60609 400 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 VPS4BO75351 444 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 ULK1O75385 1050 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 LYPLA1O75608 230 aaPredicted RBP13.01□□□□□ -0.33
APTX-231ENST00000494973 RASSF9O75901 435 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 CAPN1P07384 714 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 TSPAN8P19075 237 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 MAGP20916 626 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 MPSTP25325 297 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 AHRP35869 848 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 PIK3CBP42338 1070 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 GYS2P54840 703 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 CSTF3Q12996 717 aaKnown RBP13.01□□□□□ -0.33
APTX-231ENST00000494973 CPSF6Q16630 551 aaKnown RBP eCLIP13.01□□□□□ -0.33
APTX-231ENST00000494973 CATSPEREQ5SY80 951 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 CACHD1Q5VU97 1274 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 KIAA1614Q5VZ46 1190 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 FIGLAQ6QHK4 219 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 CPLX4Q7Z7G2 160 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 PAQR7Q86WK9 346 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 LAS2Q8IYD9 372 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 LRRC34Q8IZ02 419 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 ZNF781Q8N8C0 355 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 TRPV3Q8NET8 790 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 RERGQ96A58 199 aaPredicted RBP13.01□□□□□ -0.33
APTX-231ENST00000494973 TMEM74Q96NL1 305 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 PRAP1Q96NZ9 151 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 NLNQ9BYT8 704 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 EPN3Q9H201 632 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 SYNDIG1Q9H7V2 258 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 BRF2Q9HAW0 419 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 FANCEQ9HB96 536 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 PDE7BQ9NP56 450 aa13.01□□□□□ -0.33
APTX-231ENST00000494973 SLCO1B3Q9NPD5 702 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms