RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 RIC8BQ9NVN3 520 aa22.09■■□□□ 1.13
COL27A1-208ENST00000494780 PTGFRNQ9P2B2 879 aa22.09■■□□□ 1.13
COL27A1-208ENST00000494780 KLHL42Q9P2K6 505 aa22.09■■□□□ 1.13
COL27A1-208ENST00000494780 CREBBPQ92793 2442 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.08■■□□□ 1.13
COL27A1-208ENST00000494780 IGHV1-45A0A0A0MS14 117 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 BMP10O95393 424 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 HEXBP07686 556 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 ANXA5P08758 320 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 MAGEA6P43360 314 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 CLCN7P51798 805 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 ABATP80404 500 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 KCNJ11Q14654 390 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 RIPOR1Q6ZS17 1223 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 ZNF662Q6ZS27 426 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 REXO1L1PQ8IX06 675 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 SLC34A3Q8N130 599 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 ARHGEF39Q8N4T4 335 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 AMER3Q8N944 861 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 BRIX1Q8TDN6 353 aaKnown RBP22.08■■□□□ 1.13
COL27A1-208ENST00000494780 ZNF480Q8WV37 535 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 HAS2Q92819 552 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 MMABQ96EY8 250 aaPredicted RBP22.08■■□□□ 1.13
COL27A1-208ENST00000494780 SYNPO2LQ9H987 977 aa22.08■■□□□ 1.13
COL27A1-208ENST00000494780 TRAV17A0A0B4J275 112 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 E7ENX8 843 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 FFAR3O14843 346 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 GPR42O15529 346 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 AVILO75366 819 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 SLC16A8O95907 504 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 STSP08842 583 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 TNFSF10P50591 281 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 TAP2Q03519 686 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 EEF1A2Q05639 463 aaKnown RBP22.07■■□□□ 1.12
COL27A1-208ENST00000494780 INAQ16352 499 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 ZNF324BQ6AW86 544 aaPredicted RBP22.07■■□□□ 1.12
COL27A1-208ENST00000494780 CASC4Q6P4E1 433 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 DRC3Q9H069 523 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 SAMD15Q9P1V8 674 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 PCYOX1Q9UHG3 505 aa22.07■■□□□ 1.12
COL27A1-208ENST00000494780 LOC102723996A0A087X1L8 192 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 A0A1B0GUH1 482 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 FAM237BA0A1B0GVD1 139 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 MAGEB16A2A368 324 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 FOXS1O43638 330 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 CEP104O60308 925 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 JRKO75564 520 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 WFS1O76024 890 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 TERF1P54274 439 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 AP2B1P63010 937 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 TRIP13Q15645 432 aaPredicted RBP22.06■■□□□ 1.12
COL27A1-208ENST00000494780 ZRSR2Q15696 482 aaKnown RBP22.06■■□□□ 1.12
COL27A1-208ENST00000494780 TICAM1Q8IUC6 712 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 PRELID2Q8N945 189 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 PPFIBP2Q8ND30 876 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 ASB11Q8WXH4 323 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 MAGEB10Q96LZ2 347 aaPredicted RBP22.06■■□□□ 1.12
COL27A1-208ENST00000494780 SLC30A3Q99726 388 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 EBNA1BP2Q99848 306 aaKnown RBP22.06■■□□□ 1.12
COL27A1-208ENST00000494780 LZTFL1Q9NQ48 299 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 PLA2G3Q9NZ20 509 aa22.06■■□□□ 1.12
COL27A1-208ENST00000494780 MRPS2Q9Y399 296 aaKnown RBP22.06■■□□□ 1.12
COL27A1-208ENST00000494780 DIDO1Q9BTC0 2240 aaKnown RBP22.06■■□□□ 1.12
COL27A1-208ENST00000494780 HEATR5BQ9P2D3 2071 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 SVILO95425 2214 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 A0A0A6YYC8 382 aaPredicted RBP22.05■■□□□ 1.12
COL27A1-208ENST00000494780 CTAGE9A4FU28 777 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 ENO4A6NNW6 628 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 I3L1I5 382 aaPredicted RBP22.05■■□□□ 1.12
COL27A1-208ENST00000494780 SMAPO00193 183 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 MPC1LP0DKB6 136 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 MLNP12872 115 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 ICAM2P13598 275 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 ENO3P13929 434 aaPredicted RBP22.05■■□□□ 1.12
COL27A1-208ENST00000494780 GPS1Q13098 491 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 THOC5Q13769 683 aaKnown RBP22.05■■□□□ 1.12
COL27A1-208ENST00000494780 DHX34Q14147 1143 aaKnown RBP22.05■■□□□ 1.12
COL27A1-208ENST00000494780 FAM53BQ14153 422 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 NDUFA9Q16795 377 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 ZNF470Q6ECI4 717 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 FAAH2Q6GMR7 532 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 TMEM205Q6UW68 189 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 CAND1Q86VP6 1230 aaKnown RBP22.05■■□□□ 1.12
COL27A1-208ENST00000494780 SIRT6Q8N6T7 355 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 TRIM58Q8NG06 486 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 GIMAP7Q8NHV1 300 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 KCNJ9Q92806 393 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 ZNF700Q9H0M5 742 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 CCDC68Q9H2F9 335 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 CROCCQ5TZA2 2017 aa22.05■■□□□ 1.12
COL27A1-208ENST00000494780 ZGRF1Q86YA3 2104 aa22.04■■□□□ 1.12
COL27A1-208ENST00000494780 SYF2O95926 243 aaKnown RBP22.04■■□□□ 1.12
COL27A1-208ENST00000494780 UQCRHP07919 91 aa22.04■■□□□ 1.12
COL27A1-208ENST00000494780 CCDC175P0C221 793 aa22.04■■□□□ 1.12
COL27A1-208ENST00000494780 VPS41P49754 854 aa22.04■■□□□ 1.12
COL27A1-208ENST00000494780 KCTD19Q17RG1 926 aaPredicted RBP22.04■■□□□ 1.12
COL27A1-208ENST00000494780 ADCK2Q7Z695 626 aa22.04■■□□□ 1.12
COL27A1-208ENST00000494780 ZC3H7AQ8IWR0 971 aaKnown RBP22.04■■□□□ 1.12
COL27A1-208ENST00000494780 LRRC56Q8IYG6 542 aaPredicted RBP22.04■■□□□ 1.12
COL27A1-208ENST00000494780 ZNF669Q96BR6 464 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms