RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 CRYMQ14894 314 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 RBBP7Q16576 425 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 HSP90AA5PQ58FG0 334 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 RBM20Q5T481 1227 aaKnown RBP11.08□□□□□ -0.64
VTI1A-208ENST00000494728 FHL5Q5TD97 284 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 IGFL2Q6UWQ7 119 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 NEK10Q6ZWH5 1172 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 PRSS41Q7RTY9 318 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 IGDCC3Q8IVU1 814 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 CSNK1A1LQ8N752 337 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 FBXO15Q8NCQ5 510 aaPredicted RBP11.08□□□□□ -0.64
VTI1A-208ENST00000494728 MAGEC3Q8TD91 643 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 SSC4DQ8WTU2 575 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 ASB11Q8WXH4 323 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 SMPDL3AQ92484 453 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 CABS1Q96KC9 395 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 OSBPL9Q96SU4 736 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 WDR77Q9BQA1 342 aaPredicted RBP11.08□□□□□ -0.64
VTI1A-208ENST00000494728 WDR83Q9BRX9 315 aaKnown RBP11.08□□□□□ -0.64
VTI1A-208ENST00000494728 ILKAPQ9H0C8 392 aaPredicted RBP11.08□□□□□ -0.64
VTI1A-208ENST00000494728 ZNF160Q9HCG1 818 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 SEMA3GQ9NS98 782 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 PLEKHB1Q9UF11 243 aaPredicted RBP11.08□□□□□ -0.64
VTI1A-208ENST00000494728 PCYOX1Q9UHG3 505 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 C3orf18Q9UK00 162 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 NXT1Q9UKK6 140 aaKnown RBP11.08□□□□□ -0.64
VTI1A-208ENST00000494728 FBXO5Q9UKT4 447 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 JRKLQ9Y4A0 524 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 MRFAP1Q9Y605 127 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 MAD1L1Q9Y6D9 718 aa11.08□□□□□ -0.64
VTI1A-208ENST00000494728 ADGRG4Q8IZF6 3080 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 GFYI3L273 518 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 SYF2O95926 243 aaKnown RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 IGHEP01854 428 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 MPC1LP0DKB6 136 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 ERVK-10P10266 1014 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 ACPPP15309 386 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 SKIV2L2P42285 1042 aaKnown RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 TBPL1P62380 186 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 SARNPP82979 210 aaKnown RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 EEF1A2Q05639 463 aaKnown RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 PRDX1Q06830 199 aaKnown RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 DHX9Q08211 1270 aaKnown RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 THOC5Q13769 683 aaKnown RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 DSG2Q14126 1118 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 ARHGAP19Q14CB8 494 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 LONRF1Q17RB8 773 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 ZXDCQ2QGD7 858 aaPredicted RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 MUM1Q2TAK8 710 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 FAM214AQ32MH5 1076 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 ARMC3Q5W041 872 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 ATG9BQ674R7 924 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 VN1R4Q7Z5H5 301 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 KCNMB4Q86W47 210 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 ZC3H7AQ8IWR0 971 aaKnown RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 PRR7Q8TB68 274 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 PPP4R1Q8TF05 950 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 PSMF1Q92530 271 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 NACC2Q96BF6 587 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 MIEF2Q96C03 454 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 THOC3Q96J01 351 aaKnown RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 PBKQ96KB5 322 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 PWWP2AQ96N64 755 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 MACROD1Q9BQ69 325 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 AARSD1Q9BTE6 412 aaKnown RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 DDX47Q9H0S4 455 aaKnown RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 LRRC4CQ9HCJ2 640 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 FAM114A2Q9NRY5 505 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 IARS2Q9NSE4 1012 aaKnown RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 TRPC4Q9UBN4 977 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 ZNF282Q9UDV7 671 aaPredicted RBP11.07□□□□□ -0.64
VTI1A-208ENST00000494728 DHRS7Q9Y394 339 aa11.07□□□□□ -0.64
VTI1A-208ENST00000494728 A0A0A6YYC8 382 aaPredicted RBP11.06□□□□□ -0.64
VTI1A-208ENST00000494728 USP27XA6NNY8 438 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 IDSB3KWA1 339 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 I3L1I5 382 aaPredicted RBP11.06□□□□□ -0.64
VTI1A-208ENST00000494728 PFDN6O15212 129 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 JRKO75564 520 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 CLDN1O95832 211 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 PIM1P11309 404 aaPredicted RBP11.06□□□□□ -0.64
VTI1A-208ENST00000494728 EZRP15311 586 aaKnown RBP11.06□□□□□ -0.64
VTI1A-208ENST00000494728 SLC26A3P40879 764 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 FNTAP49354 379 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 CDKN2DP55273 166 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 PHKG1Q16816 387 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 TTLL9Q3SXZ7 439 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 FAAH2Q6GMR7 532 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 PRMT9Q6P2P2 845 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 LINC00696Q6ZRV3 163 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 UBE2R2Q712K3 238 aaPredicted RBP11.06□□□□□ -0.64
VTI1A-208ENST00000494728 ADCK2Q7Z695 626 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 PPIL6Q8IXY8 311 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 ZADH2Q8N4Q0 377 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.06□□□□□ -0.64
VTI1A-208ENST00000494728 C2CD4AQ8NCU7 369 aaPredicted RBP11.06□□□□□ -0.64
VTI1A-208ENST00000494728 ACTRT1Q8TDG2 376 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 CNDP1Q96KN2 507 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 SLC29A3Q9BZD2 475 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 LHPPQ9H008 270 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 VPS9D1Q9Y2B5 631 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms