RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 HSD17B2P37059 387 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 GRIA3P42263 894 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 ZSCAN26Q16670 478 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 LACTB2Q53H82 288 aaPredicted RBP12.65□□□□□ -0.38
ERCC3-209ENST00000494464 TCTE1Q5JU00 501 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 YOD1Q5VVQ6 348 aaPredicted RBP12.65□□□□□ -0.38
ERCC3-209ENST00000494464 LRRC8EQ6NSJ5 796 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 FIGLAQ6QHK4 219 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 RNF44Q7L0R7 432 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 PRICKLE2Q7Z3G6 844 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 MCATQ8IVS2 390 aaKnown RBP12.65□□□□□ -0.38
ERCC3-209ENST00000494464 ZNF655Q8N720 491 aaPredicted RBP12.65□□□□□ -0.38
ERCC3-209ENST00000494464 BCAS4Q8TDM0 211 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 INPP5DQ92835 1189 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 CERS2Q96G23 380 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 ABHD17AQ96GS6 310 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 SMC6Q96SB8 1091 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 GPR21Q99679 349 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 NDC1Q9BTX1 674 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 IARS2Q9NSE4 1012 aaKnown RBP12.65□□□□□ -0.38
ERCC3-209ENST00000494464 TXLNGQ9NUQ3 528 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 IRAK4Q9NWZ3 460 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 MOCS1Q9NZB8 636 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 ANKMY1Q9P2S6 941 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 KLHL20Q9Y2M5 609 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 IKBKGQ9Y6K9 419 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 HELZ2Q9BYK8 2649 aaKnown RBP12.65□□□□□ -0.38
ERCC3-209ENST00000494464 NUP210LQ5VU65 1888 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 GFYI3L273 518 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 CD63P08962 238 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 ERVK-10P10266 1014 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 CREB1P16220 341 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 CNTFP26441 200 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 SERPINB9P50453 376 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 ARSFP54793 590 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 DCDP81605 110 aaKnown RBP12.64□□□□□ -0.39
ERCC3-209ENST00000494464 NFKB2Q00653 900 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 FASTKQ14296 549 aaKnown RBP12.64□□□□□ -0.39
ERCC3-209ENST00000494464 LGSNQ5TDP6 509 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 TCTN3Q6NUS6 607 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 UGT3A1Q6NUS8 523 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 ATG14Q6ZNE5 492 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 ASB11Q8WXH4 323 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 SMPDL3AQ92484 453 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 MTBPQ96DY7 904 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 NKIRAS1Q9NYS0 192 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 DHCR7Q9UBM7 475 aaKnown RBP12.64□□□□□ -0.39
ERCC3-209ENST00000494464 SPTA1P02549 2419 aa12.64□□□□□ -0.39
ERCC3-209ENST00000494464 A0A1B0GX78 115 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 OR2A25A4D2G3 310 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 FITM1A5D6W6 292 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 NDUFAB1O14561 156 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 TYROBPO43914 113 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 SRPX2O60687 465 aaPredicted RBP12.63□□□□□ -0.39
ERCC3-209ENST00000494464 CTSVO60911 334 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 KLF7O75840 302 aaPredicted RBP12.63□□□□□ -0.39
ERCC3-209ENST00000494464 SLC16A8O95907 504 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 ONECUT2O95948 504 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 CMPK1P30085 196 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 SKIV2L2P42285 1042 aaKnown RBP12.63□□□□□ -0.39
ERCC3-209ENST00000494464 PNLIPRP1P54315 467 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 GRM7Q14831 915 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 NKAIN1Q4KMZ8 207 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 C1orf189Q5VU69 101 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 CPZQ66K79 652 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 RAB43Q86YS6 212 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 CPNE9Q8IYJ1 553 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 CDKL2Q92772 493 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 FKBP10Q96AY3 582 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 CHMP6Q96FZ7 201 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 PKP4Q99569 1192 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 MIPEPQ99797 713 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 TRIM55Q9BYV6 548 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 KCNK9Q9NPC2 374 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 PPANQ9NQ55 473 aaKnown RBP12.63□□□□□ -0.39
ERCC3-209ENST00000494464 MKS1Q9NXB0 559 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 TAS2R13Q9NYV9 303 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 NDOR1Q9UHB4 597 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 TRMT6Q9UJA5 497 aaKnown RBP12.63□□□□□ -0.39
ERCC3-209ENST00000494464 ANAPC2Q9UJX6 822 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 CORO1CQ9ULV4 474 aaPredicted RBP12.63□□□□□ -0.39
ERCC3-209ENST00000494464 TP53TG5Q9Y2B4 290 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 PCDHGA9Q9Y5G4 932 aaKnown RBP12.63□□□□□ -0.39
ERCC3-209ENST00000494464 PCM1Q15154 2024 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 SEC16AO15027 2179 aa12.63□□□□□ -0.39
ERCC3-209ENST00000494464 PCSK5Q92824 1860 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 ERICH4A6NGS2 130 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 E7ENX8 843 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 DSCR3O14972 297 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 ZBTB14O43829 449 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 KRT38O76015 456 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 ZWINTO95229 277 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 CCNDBP1O95273 360 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 GABRB3P28472 473 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 RPA3P35244 121 aaPredicted RBP12.62□□□□□ -0.39
ERCC3-209ENST00000494464 TIAL1Q01085 375 aaKnown RBP eCLIP12.62□□□□□ -0.39
ERCC3-209ENST00000494464 TAP2Q03519 686 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 SLC18A2Q05940 514 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 SP140Q13342 867 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 MPP2Q14168 576 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms