RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 DENND6AQ8IWF6 608 aa22.71■■□□□ 1.23
TTC3-224ENST00000494243 FBXO15Q8NCQ5 510 aaPredicted RBP22.71■■□□□ 1.23
TTC3-224ENST00000494243 TRIM58Q8NG06 486 aa22.71■■□□□ 1.23
TTC3-224ENST00000494243 ASB11Q8WXH4 323 aa22.71■■□□□ 1.23
TTC3-224ENST00000494243 VPS9D1Q9Y2B5 631 aa22.71■■□□□ 1.23
TTC3-224ENST00000494243 HEATR5BQ9P2D3 2071 aa22.7■■□□□ 1.23
TTC3-224ENST00000494243 NSG1A0A0A6YYJ2 146 aa22.7■■□□□ 1.22
TTC3-224ENST00000494243 ZCWPW2A0A1B0GU75 182 aa22.7■■□□□ 1.22
TTC3-224ENST00000494243 PRR35P0CG20 571 aa22.7■■□□□ 1.22
TTC3-224ENST00000494243 EDN3P14138 238 aa22.7■■□□□ 1.22
TTC3-224ENST00000494243 SOX11P35716 441 aa22.7■■□□□ 1.22
TTC3-224ENST00000494243 CTBP1Q13363 440 aa22.7■■□□□ 1.22
TTC3-224ENST00000494243 DHX34Q14147 1143 aaKnown RBP22.7■■□□□ 1.22
TTC3-224ENST00000494243 ZNF470Q6ECI4 717 aa22.7■■□□□ 1.22
TTC3-224ENST00000494243 CASC4Q6P4E1 433 aa22.7■■□□□ 1.22
TTC3-224ENST00000494243 CYHR1Q6ZMK1 362 aa22.7■■□□□ 1.22
TTC3-224ENST00000494243 LRRC56Q8IYG6 542 aaPredicted RBP22.7■■□□□ 1.22
TTC3-224ENST00000494243 TGIF2Q9GZN2 237 aa22.7■■□□□ 1.22
TTC3-224ENST00000494243 KLHL42Q9P2K6 505 aa22.7■■□□□ 1.22
TTC3-224ENST00000494243 MAGEB16A2A368 324 aa22.69■■□□□ 1.22
TTC3-224ENST00000494243 GFYI3L273 518 aa22.69■■□□□ 1.22
TTC3-224ENST00000494243 KRT14P02533 472 aa22.69■■□□□ 1.22
TTC3-224ENST00000494243 MLNP12872 115 aa22.69■■□□□ 1.22
TTC3-224ENST00000494243 EZRP15311 586 aaKnown RBP22.69■■□□□ 1.22
TTC3-224ENST00000494243 EFNA3P52797 238 aa22.69■■□□□ 1.22
TTC3-224ENST00000494243 SNRPNP63162 240 aaKnown RBP22.69■■□□□ 1.22
TTC3-224ENST00000494243 CUL1Q13616 776 aa22.69■■□□□ 1.22
TTC3-224ENST00000494243 GARNL3Q5VVW2 1013 aa22.69■■□□□ 1.22
TTC3-224ENST00000494243 RPUSD3Q6P087 351 aaKnown RBP22.69■■□□□ 1.22
TTC3-224ENST00000494243 OR1N1Q8NGS0 311 aa22.69■■□□□ 1.22
TTC3-224ENST00000494243 ZNF669Q96BR6 464 aaPredicted RBP22.69■■□□□ 1.22
TTC3-224ENST00000494243 MMABQ96EY8 250 aaPredicted RBP22.69■■□□□ 1.22
TTC3-224ENST00000494243 SLX1AQ9BQ83 275 aa22.69■■□□□ 1.22
TTC3-224ENST00000494243 YIPF2Q9BWQ6 316 aa22.69■■□□□ 1.22
TTC3-224ENST00000494243 FBXO6Q9NRD1 293 aaPredicted RBP22.69■■□□□ 1.22
TTC3-224ENST00000494243 SAMD15Q9P1V8 674 aa22.69■■□□□ 1.22
TTC3-224ENST00000494243 PCYOX1Q9UHG3 505 aa22.69■■□□□ 1.22
TTC3-224ENST00000494243 OSGIN2Q9Y236 505 aa22.69■■□□□ 1.22
TTC3-224ENST00000494243 IGHV1-45A0A0A0MS14 117 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 SDR42E2A6NKP2 422 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 ZNF839A8K0R7 811 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 SMAPO00193 183 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 P2RX6O15547 441 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 PRPF4O43172 522 aaKnown RBP eCLIP22.68■■□□□ 1.225e-17■■□□□ 14.5
TTC3-224ENST00000494243 LRRTM2O43300 516 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 CCNDBP1O95273 360 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 SERPINA7P05543 415 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 SKIV2L2P42285 1042 aaKnown RBP22.68■■□□□ 1.22
TTC3-224ENST00000494243 ABATP80404 500 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 EEF1A2Q05639 463 aaKnown RBP22.68■■□□□ 1.22
TTC3-224ENST00000494243 SYT16Q17RD7 645 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 TTLL9Q3SXZ7 439 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 FAAH2Q6GMR7 532 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 AGGF1Q8N302 714 aaeCLIP22.68■■□□□ 1.22
TTC3-224ENST00000494243 AMER2Q8N7J2 671 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 MCUQ8NE86 351 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 BRIX1Q8TDN6 353 aaKnown RBP22.68■■□□□ 1.22
TTC3-224ENST00000494243 KCNJ9Q92806 393 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 MKKSQ9NPJ1 570 aaPredicted RBP22.68■■□□□ 1.22
TTC3-224ENST00000494243 C14orf105Q9NVL8 296 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 PLA2G3Q9NZ20 509 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 PTGFRNQ9P2B2 879 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 DHRS7Q9Y394 339 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 NEU2Q9Y3R4 380 aa22.68■■□□□ 1.22
TTC3-224ENST00000494243 CACNA1DQ01668 2161 aa22.67■■□□□ 1.22
TTC3-224ENST00000494243 ITPR2Q14571 2701 aa22.67■■□□□ 1.22
TTC3-224ENST00000494243 LOC102723996A0A087X1L8 192 aa22.67■■□□□ 1.22
TTC3-224ENST00000494243 A0A0A6YYC8 382 aaPredicted RBP22.67■■□□□ 1.22
TTC3-224ENST00000494243 CTAGE9A4FU28 777 aa22.67■■□□□ 1.22
TTC3-224ENST00000494243 I3L1I5 382 aaPredicted RBP22.67■■□□□ 1.22
TTC3-224ENST00000494243 HAT1O14929 419 aa22.67■■□□□ 1.22
TTC3-224ENST00000494243 CELA2AP08217 269 aa22.67■■□□□ 1.22
TTC3-224ENST00000494243 MPC1LP0DKB6 136 aa22.67■■□□□ 1.22
TTC3-224ENST00000494243 FDXRP22570 491 aa22.67■■□□□ 1.22
TTC3-224ENST00000494243 CXCR2P25025 360 aa22.67■■□□□ 1.22
TTC3-224ENST00000494243 ZNF324BQ6AW86 544 aaPredicted RBP22.67■■□□□ 1.22
TTC3-224ENST00000494243 PLD3Q8IV08 490 aa22.67■■□□□ 1.22
TTC3-224ENST00000494243 ZC3H7AQ8IWR0 971 aaKnown RBP22.67■■□□□ 1.22
TTC3-224ENST00000494243 HAS2Q92819 552 aa22.67■■□□□ 1.22
TTC3-224ENST00000494243 RERGQ96A58 199 aaPredicted RBP22.67■■□□□ 1.22
TTC3-224ENST00000494243 SERPINB12Q96P63 405 aa22.67■■□□□ 1.22
TTC3-224ENST00000494243 DRC3Q9H069 523 aa22.67■■□□□ 1.22
TTC3-224ENST00000494243 UTP6Q9NYH9 597 aaKnown RBP22.67■■□□□ 1.22
TTC3-224ENST00000494243 MRPS2Q9Y399 296 aaKnown RBP22.67■■□□□ 1.22
TTC3-224ENST00000494243 CROCCQ5TZA2 2017 aa22.66■■□□□ 1.22
TTC3-224ENST00000494243 GOLGA8MH3BSY2 632 aa22.66■■□□□ 1.22
TTC3-224ENST00000494243 TXNDC9O14530 226 aa22.66■■□□□ 1.22
TTC3-224ENST00000494243 KIF5CO60282 957 aa22.66■■□□□ 1.22
TTC3-224ENST00000494243 BMP10O95393 424 aa22.66■■□□□ 1.22
TTC3-224ENST00000494243 SYF2O95926 243 aaKnown RBP22.66■■□□□ 1.22
TTC3-224ENST00000494243 HEXBP07686 556 aa22.66■■□□□ 1.22
TTC3-224ENST00000494243 SLC1A2P43004 574 aa22.66■■□□□ 1.22
TTC3-224ENST00000494243 MAGEA3P43357 314 aa22.66■■□□□ 1.22
TTC3-224ENST00000494243 TNFSF10P50591 281 aa22.66■■□□□ 1.22
TTC3-224ENST00000494243 THOC5Q13769 683 aaKnown RBP22.66■■□□□ 1.22
TTC3-224ENST00000494243 FAM53BQ14153 422 aa22.66■■□□□ 1.22
TTC3-224ENST00000494243 PCOLCEQ15113 449 aa22.66■■□□□ 1.22
TTC3-224ENST00000494243 TMEM205Q6UW68 189 aa22.66■■□□□ 1.22
TTC3-224ENST00000494243 FAM180AQ6UWF9 173 aa22.66■■□□□ 1.22
TTC3-224ENST00000494243 LRRC8AQ8IWT6 810 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms