RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 AGPSO00116 658 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 TP73O15350 636 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 FOXS1O43638 330 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 ZBTB14O43829 449 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 DPM1O60762 260 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 VPS26AO75436 327 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 ALBP02768 609 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 CD63P08962 238 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 PIM1P11309 404 aaPredicted RBP8.13□□□□□ -1.11
LRCH3-219ENST00000494069 ENO3P13929 434 aaPredicted RBP8.13□□□□□ -1.11
LRCH3-219ENST00000494069 TCP1P17987 556 aaKnown RBP8.13□□□□□ -1.11
LRCH3-219ENST00000494069 ITGA3P26006 1051 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 ELK3P41970 407 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 SKIV2L2P42285 1042 aaKnown RBP8.13□□□□□ -1.11
LRCH3-219ENST00000494069 EFNA3P52797 238 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 KLC1Q07866 573 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 MYBPC3Q14896 1274 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 PHKG1Q16816 387 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 SYT16Q17RD7 645 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 ZXDCQ2QGD7 858 aaPredicted RBP8.13□□□□□ -1.11
LRCH3-219ENST00000494069 SPANXN3Q5MJ09 141 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 TEDDM1Q5T9Z0 273 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 YOD1Q5VVQ6 348 aaPredicted RBP8.13□□□□□ -1.11
LRCH3-219ENST00000494069 ADCK2Q7Z695 626 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 PARP9Q8IXQ6 854 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 LMNTD2Q8IXW0 634 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 ARHGEF39Q8N4T4 335 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 CLEC1AQ8NC01 280 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 STT3BQ8TCJ2 826 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 CALML6Q8TD86 181 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 C8orf44Q96CB5 159 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 CERS2Q96G23 380 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 CFAP36Q96G28 342 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 CABS1Q96KC9 395 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 PRAP1Q96NZ9 151 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 IP6K3Q96PC2 410 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 CRB3Q9BUF7 120 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 TRIM31Q9BZY9 425 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 ATG10Q9H0Y0 220 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 SLC26A1Q9H2B4 701 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 WDR54Q9H977 334 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 ZNF304Q9HCX3 659 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 ATP13A2Q9NQ11 1180 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 TRMT6Q9UJA5 497 aaKnown RBP8.13□□□□□ -1.11
LRCH3-219ENST00000494069 IKZF3Q9UKT9 509 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 CHMP2BQ9UQN3 213 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 PDE10AQ9Y233 779 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 PCDHGB7Q9Y5F8 929 aa8.13□□□□□ -1.11
LRCH3-219ENST00000494069 SHANK1Q9Y566 2161 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 HEATR5BQ9P2D3 2071 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 A0A0A6YYC8 382 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 TCP11X1B4DZS4 312 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 I3L1I5 382 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 TTI1O43156 1089 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 JRKO75564 520 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 PIAS1O75925 651 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 TSPAN12O95859 305 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 ZGLP1P0C6A0 271 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 RNF224P0DH78 156 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 FBLP22087 321 aaKnown RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 HSD17B2P37059 387 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 ITGA8P53708 1063 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 SOX8P57073 446 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 TBPL1P62380 186 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 MAT1AQ00266 395 aaKnown RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 DR1Q01658 176 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 AIMP2Q13155 320 aaKnown RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 MRPL49Q13405 166 aaKnown RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 FASTKD3Q14CZ7 662 aaKnown RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 RBBP7Q16576 425 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 HIF1AQ16665 826 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 MUM1Q2TAK8 710 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 THEMIS2Q5TEJ8 643 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 PRAMEF13Q5VWM6 474 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 FAAH2Q6GMR7 532 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 HIBCHQ6NVY1 386 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 PRMT9Q6P2P2 845 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 TMEM207Q6UWW9 146 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 PRSS41Q7RTY9 318 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 PCGF5Q86SE9 256 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 ATCAYQ86WG3 371 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 ANKMY2Q8IV38 441 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 CNTN4Q8IWV2 1026 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 C17orf53Q8N3J3 647 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 CISD2Q8N5K1 135 aaKnown RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 AMER3Q8N944 861 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 OR11G2Q8NGC1 345 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 PNPLA2Q96AD5 504 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 ALKBH8Q96BT7 664 aaKnown RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 MIEF2Q96C03 454 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 SNRNP40Q96DI7 357 aaKnown RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 MMABQ96EY8 250 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 LINGO1Q96FE5 620 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 PDLIM2Q96JY6 352 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 CCDC138Q96M89 665 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 OLFM1Q99784 485 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 YIPF2Q9BWQ6 316 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 SLAMF7Q9NQ25 335 aa8.12□□□□□ -1.11
LRCH3-219ENST00000494069 PPANQ9NQ55 473 aaKnown RBP8.12□□□□□ -1.11
LRCH3-219ENST00000494069 TAS2R13Q9NYV9 303 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms