RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 MED26O95402 600 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 EIF2S1P05198 315 aaKnown RBP21.6■■□□□ 1.05
SNIP1-203ENST00000493916 STX2P32856 288 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 GP5P40197 560 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 GUCY2DQ02846 1103 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 NAE1Q13564 534 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 SSPNQ14714 243 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 MUM1Q2TAK8 710 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 CAPN13Q6MZZ7 669 aaPredicted RBP21.6■■□□□ 1.05
SNIP1-203ENST00000493916 PRMT9Q6P2P2 845 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 LCTLQ6UWM7 567 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 COX15Q7KZN9 410 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 OVCH1Q7RTY7 1134 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 ZNF605Q86T29 641 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 OR56A3Q8NH54 315 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 RERGQ96A58 199 aaPredicted RBP21.6■■□□□ 1.05
SNIP1-203ENST00000493916 C10orf90Q96M02 699 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 GPR22Q99680 433 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 FAM129AQ9BZQ8 928 aa21.6■■□□□ 1.05
SNIP1-203ENST00000493916 MTO1Q9Y2Z2 717 aaKnown RBP21.6■■□□□ 1.05
SNIP1-203ENST00000493916 PTRH2Q9Y3E5 179 aaKnown RBP21.6■■□□□ 1.05
SNIP1-203ENST00000493916 H7BY64 318 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 TXNDC9O14530 226 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 WISP3O95389 354 aaPredicted RBP21.59■■□□□ 1.05
SNIP1-203ENST00000493916 SLC12A2P55011 1212 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 NAB1Q13506 487 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 ZXDCQ2QGD7 858 aaPredicted RBP21.59■■□□□ 1.05
SNIP1-203ENST00000493916 CPZQ66K79 652 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 C17orf64Q86WR6 236 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 ANKRD49Q8WVL7 239 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 TSPAN17Q96FV3 270 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 PRAP1Q96NZ9 151 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 IP6K3Q96PC2 410 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 HAUS8Q9BT25 410 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 TRIM55Q9BYV6 548 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 GPAMQ9HCL2 828 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 TLK1Q9UKI8 766 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 SH2B3Q9UQQ2 575 aa21.59■■□□□ 1.05
SNIP1-203ENST00000493916 RUVBL1Q9Y265 456 aaKnown RBP21.59■■□□□ 1.05
SNIP1-203ENST00000493916 PCM1Q15154 2024 aa21.58■■□□□ 1.05
SNIP1-203ENST00000493916 GCN1Q92616 2671 aaKnown RBP21.58■■□□□ 1.05
SNIP1-203ENST00000493916 NPEPPSL1A6NEC2 478 aa21.58■■□□□ 1.05
SNIP1-203ENST00000493916 ARGFXA6NJG6 315 aa21.58■■□□□ 1.05
SNIP1-203ENST00000493916 CDC7O00311 574 aa21.58■■□□□ 1.05
SNIP1-203ENST00000493916 RPS15AP62244 130 aaKnown RBP21.58■■□□□ 1.05
SNIP1-203ENST00000493916 CDKL1Q00532 357 aa21.58■■□□□ 1.05
SNIP1-203ENST00000493916 KBTBD12Q3ZCT8 623 aa21.58■■□□□ 1.05
SNIP1-203ENST00000493916 LACTB2Q53H82 288 aaPredicted RBP21.58■■□□□ 1.05
SNIP1-203ENST00000493916 GARNL3Q5VVW2 1013 aa21.58■■□□□ 1.05
SNIP1-203ENST00000493916 MRGPREQ86SM8 312 aa21.58■■□□□ 1.05
SNIP1-203ENST00000493916 ARHGEF39Q8N4T4 335 aa21.58■■□□□ 1.05
SNIP1-203ENST00000493916 NOA1Q8NC60 698 aaKnown RBP21.58■■□□□ 1.05
SNIP1-203ENST00000493916 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.58■■□□□ 1.05
SNIP1-203ENST00000493916 PTERQ96BW5 349 aa21.58■■□□□ 1.05
SNIP1-203ENST00000493916 MVB12AQ96EY5 273 aa21.58■■□□□ 1.05
SNIP1-203ENST00000493916 CABS1Q96KC9 395 aa21.58■■□□□ 1.05
SNIP1-203ENST00000493916 ING2Q9H160 280 aa21.58■■□□□ 1.05
SNIP1-203ENST00000493916 NXT1Q9UKK6 140 aaKnown RBP21.58■■□□□ 1.05
SNIP1-203ENST00000493916 HEMK1Q9Y5R4 338 aaPredicted RBP21.58■■□□□ 1.05
SNIP1-203ENST00000493916 KCNE1BA0A087WTH5 132 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 CTAGE15A4D2H0 777 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 DNAJB5O75953 348 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 UMODP07911 640 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 CTAGE8P0CG41 777 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 ATXN8OSP0DMR3 200 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 PLA2G2AP14555 144 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 NPPBP16860 134 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 OTX2P32243 289 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 OR1D4P47884 311 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 CSNK1G2P78368 415 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 ATP1A4Q13733 1029 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 USP10Q14694 798 aaKnown RBP21.57■■□□□ 1.04
SNIP1-203ENST00000493916 NKG7Q16617 165 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 HKDC1Q2TB90 917 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 GRTP1Q5TC63 336 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 TCTN3Q6NUS6 607 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 MED25Q71SY5 747 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 ADAMTSL2Q86TH1 951 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 CTAGE6Q86UF2 777 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 CTAGE4Q8IX94 777 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 CTAGE3PQ8IX95 158 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 DTWD1Q8N5C7 304 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 METTL27Q8N6F8 245 aaPredicted RBP21.57■■□□□ 1.04
SNIP1-203ENST00000493916 TMEM102Q8N9M5 508 aaPredicted RBP21.57■■□□□ 1.04
SNIP1-203ENST00000493916 KIF18AQ8NI77 898 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 FBF1Q8TES7 1133 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 NACC2Q96BF6 587 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 TRIM44Q96DX7 344 aaPredicted RBP21.57■■□□□ 1.04
SNIP1-203ENST00000493916 THAP11Q96EK4 314 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 DERL2Q9GZP9 239 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 CAB39LQ9H9S4 337 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 ZNF304Q9HCX3 659 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 ACSS2Q9NR19 701 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 OARD1Q9Y530 152 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 SEC16AO15027 2179 aa21.57■■□□□ 1.04
SNIP1-203ENST00000493916 PCSK5Q92824 1860 aa21.56■■□□□ 1.04
SNIP1-203ENST00000493916 HEATR5BQ9P2D3 2071 aa21.56■■□□□ 1.04
SNIP1-203ENST00000493916 GUCA1CO95843 209 aa21.56■■□□□ 1.04
SNIP1-203ENST00000493916 SPRP35270 261 aaPredicted RBP21.56■■□□□ 1.04
SNIP1-203ENST00000493916 RRADP55042 308 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms