RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 SGO1Q5FBB7 561 aa18.63■□□□□ 0.57
USP39-218ENST00000493829 ADNP2Q6IQ32 1131 aa18.63■□□□□ 0.57
USP39-218ENST00000493829 BAHD1Q8TBE0 780 aaPredicted RBP18.63■□□□□ 0.57
USP39-218ENST00000493829 PTCD3Q96EY7 689 aaKnown RBP18.63■□□□□ 0.57
USP39-218ENST00000493829 ZNF317Q96PQ6 595 aaPredicted RBP18.63■□□□□ 0.57
USP39-218ENST00000493829 HBEGFQ99075 208 aa18.63■□□□□ 0.57
USP39-218ENST00000493829 LRRN3Q9H3W5 708 aa18.63■□□□□ 0.57
USP39-218ENST00000493829 EPB41L1Q9H4G0 881 aa18.63■□□□□ 0.57
USP39-218ENST00000493829 PELI2Q9HAT8 420 aa18.63■□□□□ 0.57
USP39-218ENST00000493829 GEMIN8Q9NWZ8 242 aaKnown RBP18.63■□□□□ 0.57
USP39-218ENST00000493829 BTRCQ9Y297 605 aa18.63■□□□□ 0.57
USP39-218ENST00000493829 RP1P56715 2156 aa18.63■□□□□ 0.57
USP39-218ENST00000493829 A8MU76 341 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 AZIN1O14977 448 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 ZW10O43264 779 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 PCNAP12004 261 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 ST6GAL1P15907 406 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 HTR6P50406 440 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 RPL14P50914 215 aaKnown RBP18.62■□□□□ 0.57
USP39-218ENST00000493829 CSNK1G2P78368 415 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 CYP4F3Q08477 520 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 GALNT1Q10472 559 aaPredicted RBP18.62■□□□□ 0.57
USP39-218ENST00000493829 DDX39BQ13838 428 aaKnown RBP18.62■□□□□ 0.57
USP39-218ENST00000493829 ZRSR2Q15696 482 aaKnown RBP18.62■□□□□ 0.57
USP39-218ENST00000493829 GRHL2Q6ISB3 625 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 SCIMPQ6UWF3 145 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 TMPRSS9Q7Z410 1059 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 METTL6Q8TCB7 284 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 GRAMD1AQ96CP6 724 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 MTFMTQ96DP5 389 aaKnown RBP18.62■□□□□ 0.57
USP39-218ENST00000493829 ZDHHC12Q96GR4 267 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 TRPS1Q9UHF7 1281 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 TRAF6Q9Y4K3 522 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 PTGDR2Q9Y5Y4 395 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 ASXL3Q9C0F0 2248 aa18.62■□□□□ 0.57
USP39-218ENST00000493829 KCNE1BA0A087WTH5 132 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 SLC9B1P1A6NJY1 282 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 GFRA3O60609 400 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 WFS1O76024 890 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 STATHP02808 62 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 JUPP14923 745 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 ACP1P24666 158 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 ACADVLP49748 655 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 RBBP5Q15291 538 aaKnown RBP18.61■□□□□ 0.57
USP39-218ENST00000493829 KANK2Q63ZY3 851 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 FAM129CQ86XR2 697 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 L3MBTL4Q8NA19 623 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 DEFB124Q8NES8 71 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 ABHD11Q8NFV4 315 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 EFCAB11Q9BUY7 163 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 NPHS2Q9NP85 383 aa18.61■□□□□ 0.57
USP39-218ENST00000493829 JUNP05412 331 aaKnown RBP18.6■□□□□ 0.57
USP39-218ENST00000493829 ENO1P06733 434 aaKnown RBP18.6■□□□□ 0.57
USP39-218ENST00000493829 CYP4F2P78329 520 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 CBX1P83916 185 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 REEP5Q00765 189 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 PAGE2BQ5JRK9 111 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 LIPJQ5W064 366 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 FCRL6Q6DN72 434 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 FIGLAQ6QHK4 219 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 PLXDC1Q8IUK5 500 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 RNF175Q8N4F7 328 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 FCRL4Q96PJ5 515 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 AIF1LQ9BQI0 150 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 SEMA6CQ9H3T2 930 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 EHD1Q9H4M9 534 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 FARSBQ9NSD9 589 aaKnown RBP18.6■□□□□ 0.57
USP39-218ENST00000493829 MN1Q10571 1320 aaPredicted RBP18.6■□□□□ 0.57
USP39-218ENST00000493829 GMNCA6NCL1 334 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 TLCD2A6NGC4 264 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 TNFSF14O43557 240 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 UGDHO60701 494 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 SHOX2O60902 331 aaPredicted RBP18.6■□□□□ 0.57
USP39-218ENST00000493829 CPNE6O95741 557 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 SEPHS1P49903 392 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 NEK2P51955 445 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 TBCCQ15814 346 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 ZIC1Q15915 447 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 DEFB110Q30KQ9 67 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 GGTA1PQ4G0N0 100 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 CACHD1Q5VU97 1274 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 ZNF425Q6IV72 752 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 CGB2Q6NT52 195 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 PAQR7Q86WK9 346 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 DDIASQ8IXT1 998 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 C19orf47Q8N9M1 422 aaKnown RBP18.6■□□□□ 0.57
USP39-218ENST00000493829 PIWIL2Q8TC59 973 aaKnown RBP18.6■□□□□ 0.57
USP39-218ENST00000493829 TWIST2Q8WVJ9 160 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 WDR34Q96EX3 536 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 TRAPPC9Q96Q05 1148 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 GFM1Q96RP9 751 aaKnown RBP18.6■□□□□ 0.57
USP39-218ENST00000493829 CDC6Q99741 560 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 PLCD4Q9BRC7 762 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 ELOVL6Q9H5J4 265 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 SOHLH2Q9NX45 425 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 SNX7Q9UNH6 387 aa18.6■□□□□ 0.57
USP39-218ENST00000493829 IGHV5-51A0A0C4DH38 117 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 MANBAO00462 879 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 OR1F1O43749 312 aa18.59■□□□□ 0.57
USP39-218ENST00000493829 SNUPNO95149 360 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms