RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 ZNF678Q5SXM1 525 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 ATG9BQ674R7 924 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 TTC19Q6DKK2 380 aaPredicted RBP7.3□□□□□ -1.24
VEGFA-214ENST00000493786 NXPE4Q6UWF7 544 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 BPHLQ86WA6 291 aaPredicted RBP7.3□□□□□ -1.24
VEGFA-214ENST00000493786 PAQR7Q86WK9 346 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 PPP1R3BQ86XI6 285 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 NUDCD3Q8IVD9 361 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 C10orf107Q8IVU9 208 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 GPR135Q8IZ08 494 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 D2HGDHQ8N465 521 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 TMEM151AQ8N4L1 468 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 ZNF655Q8N720 491 aaPredicted RBP7.3□□□□□ -1.24
VEGFA-214ENST00000493786 TTLQ8NG68 377 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 OR8K5Q8NH50 307 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 FLVCR1-AS1Q8TAF5 88 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 MGARPQ8TDB4 240 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 DYDC1Q8WWB3 177 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 UBE2E3Q969T4 207 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 REPS1Q96D71 796 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 L3HYPDHQ96EM0 354 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 TMEM237Q96Q45 408 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 OR4K3Q96R72 315 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 OR6C1Q96RD1 312 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 ZFYVE21Q9BQ24 234 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 EFCAB11Q9BUY7 163 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 SLC7A5P2Q9GIP4 190 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 PITHD1Q9GZP4 211 aaPredicted RBP7.3□□□□□ -1.24
VEGFA-214ENST00000493786 TWSG1Q9GZX9 223 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 CHRNA10Q9GZZ6 450 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 EHD1Q9H4M9 534 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 NOL11Q9H8H0 719 aaKnown RBP7.3□□□□□ -1.24
VEGFA-214ENST00000493786 IPPKQ9H8X2 491 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 ACTR8Q9H981 624 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 SEMA4BQ9NPR2 832 aaPredicted RBP7.3□□□□□ -1.24
VEGFA-214ENST00000493786 FGF21Q9NSA1 209 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 CUEDC1Q9NWM3 386 aaPredicted RBP7.3□□□□□ -1.24
VEGFA-214ENST00000493786 OXSMQ9NWU1 459 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 SLC39A1Q9NY26 324 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 SEMA5BQ9P283 1151 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 PISDQ9UG56 409 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 SERTAD3Q9UJW9 196 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 PCTPQ9UKL6 214 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 RARRES3Q9UL19 164 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 PLCL2Q9UPR0 1127 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 KLK4Q9Y5K2 254 aa7.3□□□□□ -1.24
VEGFA-214ENST00000493786 A0A0J9YVX5 310 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 TRBC2A0A5B9 178 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 LRRC14BA6NHZ5 514 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 B4E171 279 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 H3BQF6 201 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 E2F3O00716 465 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 TXNDC9O14530 226 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 POLR1CO15160 346 aaPredicted RBP7.29□□□□□ -1.24
VEGFA-214ENST00000493786 BIRC5O15392 142 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 OR1F1O43749 312 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 SRPX2O60687 465 aaPredicted RBP7.29□□□□□ -1.24
VEGFA-214ENST00000493786 UGDHO60701 494 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 CLDN9O95484 217 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 EIF2S1P05198 315 aaKnown RBP7.29□□□□□ -1.24
VEGFA-214ENST00000493786 BPGMP07738 259 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 RPS17P08708 135 aaKnown RBP7.29□□□□□ -1.24
VEGFA-214ENST00000493786 MSL3P1P0C860 447 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 FOLR1P15328 257 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 NR1D1P20393 614 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 ALDH3A1P30838 453 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 SERPINB5P36952 375 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 HNF4AP41235 474 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 TSPAN7P41732 249 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 SERPINB4P48594 390 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 SLC18A1P54219 525 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 NAGLUP54802 743 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 ITGA1P56199 1179 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 PPP2R2AP63151 447 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 SH3BP2P78314 561 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 GABREP78334 506 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 CSNK1G2P78368 415 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 REEP5Q00765 189 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 MEF2AQ02078 507 aaPredicted RBP7.29□□□□□ -1.24
VEGFA-214ENST00000493786 RELAQ04206 551 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 CLCQ05315 142 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 CYP4F3Q08477 520 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 LCP2Q13094 533 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 DOC2AQ14183 400 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 SLBPQ14493 270 aaKnown RBP eCLIP7.29□□□□□ -1.24
VEGFA-214ENST00000493786 IL11RAQ14626 422 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 KCNAB1Q14722 419 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 PCLAFQ15004 111 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 GPR19Q15760 415 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 TBCCQ15814 346 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 ZIC1Q15915 447 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 ZXDCQ2QGD7 858 aaPredicted RBP7.29□□□□□ -1.24
VEGFA-214ENST00000493786 DEFB110Q30KQ9 67 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 TCTE1Q5JU00 501 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 CATSPEREQ5SY80 951 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 DCAF12Q5T6F0 453 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 LIPJQ5W064 366 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 FCRL6Q6DN72 434 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 ZNF425Q6IV72 752 aa7.29□□□□□ -1.24
VEGFA-214ENST00000493786 CEACAM20Q6UY09 585 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms