RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 NRTNQ99748 197 aa12.74□□□□□ -0.37
SNX12-205ENST00000490561 PLCD4Q9BRC7 762 aa12.74□□□□□ -0.37
SNX12-205ENST00000490561 DPH7Q9BTV6 452 aa12.74□□□□□ -0.37
SNX12-205ENST00000490561 SARGQ9BW04 601 aa12.74□□□□□ -0.37
SNX12-205ENST00000490561 TRAF6Q9Y4K3 522 aa12.74□□□□□ -0.37
SNX12-205ENST00000490561 PCDHGA11Q9Y5H2 935 aa12.74□□□□□ -0.37
SNX12-205ENST00000490561 PCDHGA1Q9Y5H4 931 aa12.74□□□□□ -0.37
SNX12-205ENST00000490561 GPR179Q6PRD1 2367 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 TRBC2A0A5B9 178 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 GMNCA6NCL1 334 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 UBFD1O14562 309 aaKnown RBP12.73□□□□□ -0.37
SNX12-205ENST00000490561 OR4F21O95013 312 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 MYF5P13349 255 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 MPSTP25325 297 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 ARRB2P32121 409 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 GRIA3P42263 894 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 ACADVLP49748 655 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 RPS15AP62244 130 aaKnown RBP12.73□□□□□ -0.37
SNX12-205ENST00000490561 CSNK1G2P78368 415 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 SLBPQ14493 270 aaKnown RBP eCLIP12.73□□□□□ -0.37
SNX12-205ENST00000490561 CATSPEREQ5SY80 951 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 NKAIN2Q5VXU1 208 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 ZNF425Q6IV72 752 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 LETMD1Q6P1Q0 360 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 FIGLAQ6QHK4 219 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 FAM47EQ6ZV65 393 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 GLRX5Q86SX6 157 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 PAQR7Q86WK9 346 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 FAM129CQ86XR2 697 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 ZNF781Q8N8C0 355 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 CDYL2Q8N8U2 506 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 OR4D9Q8NGE8 314 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 CCT6BQ92526 530 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 MOCOSQ96EN8 888 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 TGM7Q96PF1 710 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 ZNF317Q96PQ6 595 aaPredicted RBP12.73□□□□□ -0.37
SNX12-205ENST00000490561 GFM1Q96RP9 751 aaKnown RBP12.73□□□□□ -0.37
SNX12-205ENST00000490561 ELOVL6Q9H5J4 265 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 SLC6A20Q9NP91 592 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 ACSS2Q9NR19 701 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 CUEDC1Q9NWM3 386 aaPredicted RBP12.73□□□□□ -0.37
SNX12-205ENST00000490561 GEMIN8Q9NWZ8 242 aaKnown RBP12.73□□□□□ -0.37
SNX12-205ENST00000490561 SEMA5BQ9P283 1151 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 ZDHHC2Q9UIJ5 367 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 RNF11Q9Y3C5 154 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 CABIN1Q9Y6J0 2220 aa12.73□□□□□ -0.37
SNX12-205ENST00000490561 KCNE1BA0A087WTH5 132 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.72□□□□□ -0.37
SNX12-205ENST00000490561 OR2A25A4D2G3 310 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 TRPC5OSA6NMA1 111 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 H7BY64 318 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 NTN3O00634 580 aaPredicted RBP12.72□□□□□ -0.37
SNX12-205ENST00000490561 PPP6CO00743 305 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 RFPL3O75679 317 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 ZBTB11O95625 1053 aaPredicted RBP12.72□□□□□ -0.37
SNX12-205ENST00000490561 CAPN1P07384 714 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 ANKRD34CP0C6C1 535 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 HSD3B1P14060 373 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 CSRP1P21291 193 aaKnown RBP12.72□□□□□ -0.37
SNX12-205ENST00000490561 HSD3B2P26439 372 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 VARSP26640 1264 aaKnown RBP12.72□□□□□ -0.37
SNX12-205ENST00000490561 CCR10P46092 362 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 ARL4DP49703 201 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 CCL7P80098 99 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 TRA2AQ13595 282 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNX12-205ENST00000490561 SPIDRQ14159 915 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 ZC3H12BQ5HYM0 836 aaKnown RBP12.72□□□□□ -0.37
SNX12-205ENST00000490561 CACHD1Q5VU97 1274 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 FRG2Q64ET8 278 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 TMIGD1Q6UXZ0 262 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 LAS2Q8IYD9 372 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 LRRC34Q8IZ02 419 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 C19orf47Q8N9M1 422 aaKnown RBP12.72□□□□□ -0.37
SNX12-205ENST00000490561 STON2Q8WXE9 905 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 TCTN2Q96GX1 697 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 PRAP1Q96NZ9 151 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 TRAPPC9Q96Q05 1148 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 CDK15Q96Q40 435 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 FRG2BQ96QU4 278 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 TRIM55Q9BYV6 548 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 SHCBP1LQ9BZQ2 653 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 C20orf27Q9GZN8 174 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 EPN3Q9H201 632 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 SLCO1B3Q9NPD5 702 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 PSD3Q9NYI0 1048 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 PDP2Q9P2J9 529 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 ZNF225Q9UK10 706 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 PPT2Q9UMR5 302 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 SH2B3Q9UQQ2 575 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 ANKRD12Q6UB98 2062 aa12.72□□□□□ -0.37
SNX12-205ENST00000490561 MUC6Q6W4X9 2439 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 OTOGLQ3ZCN5 2332 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 IGKV1-8A0A0C4DH67 115 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 A0A1W2PQM1 296 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 SERTM1A2A2V5 107 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 TMX2-CTNND1H3BSU7 103 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 MANBAO00462 879 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 HDAC3O15379 428 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 GDF9O60383 454 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 GFRA3O60609 400 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms