RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 MKL2Q9ULH7 1088 aa18.5■□□□□ 0.55
APTX-229ENST00000489583 IGLV3-12A0A075B6K2 115 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 IGHV1-45A0A0A0MS14 117 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 A0A0U1RQJ8 604 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 SYF2O95926 243 aaKnown RBP18.49■□□□□ 0.55
APTX-229ENST00000489583 COX6A1P12074 109 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 KCNK10P57789 538 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 RPS6KA1Q15418 735 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 PRTGQ2VWP7 1150 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 FBXO42Q6P3S6 717 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 CASC4Q6P4E1 433 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 SUSD1Q6UWL2 747 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 DTWD1Q8N5C7 304 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 FAM136AQ96C01 138 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 CHST11Q9NPF2 352 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 TREX1Q9NSU2 369 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 SEC14L3Q9UDX4 400 aa18.49■□□□□ 0.55
APTX-229ENST00000489583 C19orf25Q9UFG5 118 aaPredicted RBP18.49■□□□□ 0.55
APTX-229ENST00000489583 SNRNP200O75643 2136 aaKnown RBP18.49■□□□□ 0.55
APTX-229ENST00000489583 MDC1Q14676 2089 aaKnown RBP18.48■□□□□ 0.55
APTX-229ENST00000489583 MATN4O95460 622 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 NMBRP28336 390 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 RPL22P35268 128 aaKnown RBP18.48■□□□□ 0.55
APTX-229ENST00000489583 PNLIPRP1P54315 467 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 ABATP80404 500 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 CDK16Q00536 496 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 ZNF33BQ06732 778 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 ART3Q13508 389 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 FASTKQ14296 549 aaKnown RBP18.48■□□□□ 0.55
APTX-229ENST00000489583 CCNG2Q16589 344 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 LRRC8BQ6P9F7 803 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 PRUNE1Q86TP1 453 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 LAPTM4BQ86VI4 370 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 RELTQ969Z4 430 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 C10orf90Q96M02 699 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 TRIM56Q9BRZ2 755 aaKnown RBP18.48■□□□□ 0.55
APTX-229ENST00000489583 TUBB6Q9BUF5 446 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 TGIF2Q9GZN2 237 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 STMN3Q9NZ72 180 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 TAC3Q9UHF0 121 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 RUVBL1Q9Y265 456 aaKnown RBP18.48■□□□□ 0.55
APTX-229ENST00000489583 CRYL1Q9Y2S2 319 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 CAPN6Q9Y6Q1 641 aa18.48■□□□□ 0.55
APTX-229ENST00000489583 A0A1W2PPV9 198 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 CCL21O00585 134 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 NIPSNAP2O75323 286 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 UNC5CO95185 931 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 C8orf89P0DMQ9 161 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 MGAT1P26572 445 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 SOX11P35716 441 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 SLC26A3P40879 764 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 ADARP55265 1226 aaKnown RBP18.47■□□□□ 0.55
APTX-229ENST00000489583 PRDX1Q06830 199 aaKnown RBP18.47■□□□□ 0.55
APTX-229ENST00000489583 KLHL38Q2WGJ6 581 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 ICE2Q659A1 982 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 HIBCHQ6NVY1 386 aaPredicted RBP18.47■□□□□ 0.55
APTX-229ENST00000489583 MCEMP1Q8IX19 187 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 TRIM58Q8NG06 486 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 RNF32Q9H0A6 362 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 PCYOX1Q9UHG3 505 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 ZKSCAN5Q9Y2L8 839 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 KLF2Q9Y5W3 355 aaPredicted RBP18.47■□□□□ 0.55
APTX-229ENST00000489583 POLEQ07864 2286 aa18.47■□□□□ 0.55
APTX-229ENST00000489583 A0A0A6YYC8 382 aaPredicted RBP18.46■□□□□ 0.55
APTX-229ENST00000489583 CTAGE9A4FU28 777 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 KRT87PA6NCN2 255 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 OR5H15A6NDH6 313 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 GOLGA8KD6RF30 607 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 GOLGA8TH3BQL2 631 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 I3L1I5 382 aaPredicted RBP18.46■□□□□ 0.55
APTX-229ENST00000489583 ZBTB14O43829 449 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 PRAMEF2O60811 474 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 WDPCPO95876 746 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 F10P00742 488 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 ZSCAN5DPP0CG00 497 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 ESRRAP11474 423 aaPredicted RBP18.46■□□□□ 0.55
APTX-229ENST00000489583 OGNP20774 298 aaKnown RBP18.46■□□□□ 0.55
APTX-229ENST00000489583 THOC5Q13769 683 aaKnown RBP18.46■□□□□ 0.55
APTX-229ENST00000489583 FAM53BQ14153 422 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 HKDC1Q2TB90 917 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 MINDY4Q4G0A6 757 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 CTSL3PQ5NE16 218 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 RPTNQ6XPR3 784 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 LPGAT1Q92604 370 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 TRIM44Q96DX7 344 aaPredicted RBP18.46■□□□□ 0.55
APTX-229ENST00000489583 MFSD3Q96ES6 412 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 BIRC8Q96P09 236 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 KIFC1Q9BW19 673 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 ZNF700Q9H0M5 742 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 HOMER3Q9NSC5 361 aa18.46■□□□□ 0.55
APTX-229ENST00000489583 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.46■□□□□ 0.55
APTX-229ENST00000489583 DOCK10Q96BY6 2186 aa18.45■□□□□ 0.54
APTX-229ENST00000489583 CNTRLQ7Z7A1 2325 aa18.45■□□□□ 0.54
APTX-229ENST00000489583 LRBAP50851 2863 aa18.45■□□□□ 0.54
APTX-229ENST00000489583 DIDO1Q9BTC0 2240 aaKnown RBP18.45■□□□□ 0.54
APTX-229ENST00000489583 A8MUI8 341 aa18.45■□□□□ 0.54
APTX-229ENST00000489583 ARHGEF33A8MVX0 844 aa18.45■□□□□ 0.54
APTX-229ENST00000489583 MYO1CO00159 1063 aa18.45■□□□□ 0.54
APTX-229ENST00000489583 SMAPO00193 183 aa18.45■□□□□ 0.54
APTX-229ENST00000489583 FFAR3O14843 346 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms