RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 RELAQ04206 551 aa23.83■■□□□ 1.41
HMGN1-217ENST00000489072 AGTRAPQ6RW13 159 aa23.83■■□□□ 1.41
HMGN1-217ENST00000489072 SHISA6Q6ZSJ9 500 aa23.83■■□□□ 1.41
HMGN1-217ENST00000489072 ADCK2Q7Z695 626 aa23.83■■□□□ 1.41
HMGN1-217ENST00000489072 ZBED8Q8IZ13 594 aa23.83■■□□□ 1.41
HMGN1-217ENST00000489072 CSNK1A1LQ8N752 337 aa23.83■■□□□ 1.41
HMGN1-217ENST00000489072 SOX17Q9H6I2 414 aaPredicted RBP23.83■■□□□ 1.41
HMGN1-217ENST00000489072 ZNF304Q9HCX3 659 aa23.83■■□□□ 1.41
HMGN1-217ENST00000489072 SH2B3Q9UQQ2 575 aa23.83■■□□□ 1.41
HMGN1-217ENST00000489072 RUVBL1Q9Y265 456 aaKnown RBP23.83■■□□□ 1.41
HMGN1-217ENST00000489072 H7BY64 318 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 P2RX6O15547 441 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 KCNC4Q03721 635 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 RAPSNQ13702 412 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 ZXDCQ2QGD7 858 aaPredicted RBP23.82■■□□□ 1.4
HMGN1-217ENST00000489072 MUM1Q2TAK8 710 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 DCAF10Q5QP82 559 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 PRAMEF13Q5VWM6 474 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 DUPD1Q68J44 220 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 TMEM207Q6UWW9 146 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 ZC3HC1Q86WB0 502 aaKnown RBP23.82■■□□□ 1.4
HMGN1-217ENST00000489072 PALM2Q8IXS6 379 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 ARHGEF39Q8N4T4 335 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 BBOF1Q8ND07 529 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 CABS1Q96KC9 395 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 PRAP1Q96NZ9 151 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 ATG10Q9H0Y0 220 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 UTP6Q9NYH9 597 aaKnown RBP23.82■■□□□ 1.4
HMGN1-217ENST00000489072 GRHL1Q9NZI5 618 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 WHRNQ9P202 907 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 IKZF3Q9UKT9 509 aa23.82■■□□□ 1.4
HMGN1-217ENST00000489072 VSTM2BA6NLU5 285 aa23.81■■□□□ 1.4
HMGN1-217ENST00000489072 PEX12O00623 359 aa23.81■■□□□ 1.4
HMGN1-217ENST00000489072 NDC80O14777 642 aa23.81■■□□□ 1.4
HMGN1-217ENST00000489072 EMP3P54852 163 aa23.81■■□□□ 1.4
HMGN1-217ENST00000489072 PRMT9Q6P2P2 845 aa23.81■■□□□ 1.4
HMGN1-217ENST00000489072 CAPN12Q6ZSI9 719 aa23.81■■□□□ 1.4
HMGN1-217ENST00000489072 MAATS1Q7Z4T9 603 aa23.81■■□□□ 1.4
HMGN1-217ENST00000489072 STRA8Q7Z7C7 330 aa23.81■■□□□ 1.4
HMGN1-217ENST00000489072 COL26A1Q96A83 441 aa23.81■■□□□ 1.4
HMGN1-217ENST00000489072 FER1L6-AS2Q96M78 137 aa23.81■■□□□ 1.4
HMGN1-217ENST00000489072 CLMPQ9H6B4 373 aa23.81■■□□□ 1.4
HMGN1-217ENST00000489072 SMYD2Q9NRG4 433 aa23.81■■□□□ 1.4
HMGN1-217ENST00000489072 GPR83Q9NYM4 423 aa23.81■■□□□ 1.4
HMGN1-217ENST00000489072 RP1L1Q8IWN7 2480 aaPredicted RBP23.81■■□□□ 1.4
HMGN1-217ENST00000489072 PIAS1O75925 651 aa23.8■■□□□ 1.4
HMGN1-217ENST00000489072 MMP11P24347 488 aa23.8■■□□□ 1.4
HMGN1-217ENST00000489072 SNRPNP63162 240 aaKnown RBP23.8■■□□□ 1.4
HMGN1-217ENST00000489072 CALCOCO2Q13137 446 aa23.8■■□□□ 1.4
HMGN1-217ENST00000489072 NAE1Q13564 534 aa23.8■■□□□ 1.4
HMGN1-217ENST00000489072 IGFBP7Q16270 282 aa23.8■■□□□ 1.4
HMGN1-217ENST00000489072 NADK2Q4G0N4 442 aa23.8■■□□□ 1.4
HMGN1-217ENST00000489072 RERGQ96A58 199 aaPredicted RBP23.8■■□□□ 1.4
HMGN1-217ENST00000489072 SGPP1Q9BX95 441 aa23.8■■□□□ 1.4
HMGN1-217ENST00000489072 TMEM184CQ9NVA4 438 aa23.8■■□□□ 1.4
HMGN1-217ENST00000489072 CDC23Q9UJX2 597 aa23.8■■□□□ 1.4
HMGN1-217ENST00000489072 NXT1Q9UKK6 140 aaKnown RBP23.8■■□□□ 1.4
HMGN1-217ENST00000489072 ZNF451Q9Y4E5 1061 aa23.8■■□□□ 1.4
HMGN1-217ENST00000489072 PCDHGB7Q9Y5F8 929 aa23.8■■□□□ 1.4
HMGN1-217ENST00000489072 HS3ST3B1Q9Y662 390 aa23.8■■□□□ 1.4
HMGN1-217ENST00000489072 RELNP78509 3460 aa23.79■■□□□ 1.4
HMGN1-217ENST00000489072 AGPSO00116 658 aa23.79■■□□□ 1.4
HMGN1-217ENST00000489072 SOCS6O14544 535 aa23.79■■□□□ 1.4
HMGN1-217ENST00000489072 STATHP02808 62 aa23.79■■□□□ 1.4
HMGN1-217ENST00000489072 SAT1P21673 171 aa23.79■■□□□ 1.4
HMGN1-217ENST00000489072 FOXK1P85037 733 aa23.79■■□□□ 1.4
HMGN1-217ENST00000489072 SLC26A11Q86WA9 606 aa23.79■■□□□ 1.4
HMGN1-217ENST00000489072 CLEC1AQ8NC01 280 aa23.79■■□□□ 1.4
HMGN1-217ENST00000489072 ALKBH8Q96BT7 664 aaKnown RBP23.79■■□□□ 1.4
HMGN1-217ENST00000489072 SMAD5Q99717 465 aaKnown RBP23.79■■□□□ 1.4
HMGN1-217ENST00000489072 MCMBPQ9BTE3 642 aa23.79■■□□□ 1.4
HMGN1-217ENST00000489072 PCBD2Q9H0N5 130 aa23.79■■□□□ 1.4
HMGN1-217ENST00000489072 SAYSD1Q9NPB0 183 aa23.79■■□□□ 1.4
HMGN1-217ENST00000489072 FAM95CA0A1B0GW59 222 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 FOXS1O43638 330 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 IGHEP01854 428 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 HIST1H2AGP0C0S8 130 aaPredicted RBP23.78■■□□□ 1.4
HMGN1-217ENST00000489072 ZNF37AP17032 561 aaPredicted RBP23.78■■□□□ 1.4
HMGN1-217ENST00000489072 HIST1H2ADP20671 130 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 FBLP22087 321 aaKnown RBP23.78■■□□□ 1.4
HMGN1-217ENST00000489072 HRH2P25021 359 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 SSTR1P30872 391 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 TAS2R39P59534 338 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 CSNK1G2P78368 415 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 ZNF460Q14592 562 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 GARNL3Q5VVW2 1013 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 VN1R4Q7Z5H5 301 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 PRSS58Q8IYP2 241 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 GALNT16Q8N428 558 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 STT3BQ8TCJ2 826 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 PYROXD1Q8WU10 500 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 NACC2Q96BF6 587 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 PDLIM5Q96HC4 596 aaKnown RBP23.78■■□□□ 1.4
HMGN1-217ENST00000489072 HIST1H2AHQ96KK5 128 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 HIST1H2AJQ99878 128 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 MESP1Q9BRJ9 268 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 H2AFJQ9BTM1 129 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 ARL15Q9NXU5 204 aa23.78■■□□□ 1.4
HMGN1-217ENST00000489072 ZNF282Q9UDV7 671 aaPredicted RBP23.78■■□□□ 1.4
HMGN1-217ENST00000489072 FBXL4Q9UKA2 621 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms