RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 SLC17A6Q9P2U8 582 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 ZNF282Q9UDV7 671 aaPredicted RBP21.92■■□□□ 1.1
COL9A3-213ENST00000489045 ADAMTS6Q9UKP5 1117 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 HAT1O14929 419 aa21.91■■□□□ 1.1
COL9A3-213ENST00000489045 ZGLP1P0C6A0 271 aa21.91■■□□□ 1.1
COL9A3-213ENST00000489045 RGS4P49798 205 aa21.91■■□□□ 1.1
COL9A3-213ENST00000489045 CDKN2DP55273 166 aa21.91■■□□□ 1.1
COL9A3-213ENST00000489045 TBPL1P62380 186 aa21.91■■□□□ 1.1
COL9A3-213ENST00000489045 DR1Q01658 176 aa21.91■■□□□ 1.1
COL9A3-213ENST00000489045 KLC1Q07866 573 aa21.91■■□□□ 1.1
COL9A3-213ENST00000489045 TUBB8Q3ZCM7 444 aa21.91■■□□□ 1.1
COL9A3-213ENST00000489045 HP1BP3Q5SSJ5 553 aaPredicted RBP21.91■■□□□ 1.1
COL9A3-213ENST00000489045 PRAMEF13Q5VWM6 474 aa21.91■■□□□ 1.1
COL9A3-213ENST00000489045 FAM26EQ8N5C1 309 aa21.91■■□□□ 1.1
COL9A3-213ENST00000489045 RERGQ96A58 199 aaPredicted RBP21.91■■□□□ 1.1
COL9A3-213ENST00000489045 PWWP2AQ96N64 755 aa21.91■■□□□ 1.1
COL9A3-213ENST00000489045 CCDC177Q9NQR7 707 aaPredicted RBP21.91■■□□□ 1.1
COL9A3-213ENST00000489045 CHMP2BQ9UQN3 213 aa21.91■■□□□ 1.1
COL9A3-213ENST00000489045 P2RX6O15547 441 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 IPO13O94829 963 aaKnown RBP21.9■■□□□ 1.1
COL9A3-213ENST00000489045 AHSGP02765 367 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 GNLYP22749 145 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 ELK3P41970 407 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 RELAQ04206 551 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 MORF4L2Q15014 288 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 PAQR3Q6TCH7 311 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 IGFL3Q6UXB1 125 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 MBOAT1Q6ZNC8 495 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 KIAA0408Q6ZU52 694 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 SYDE1Q6ZW31 735 aaPredicted RBP21.9■■□□□ 1.1
COL9A3-213ENST00000489045 PLD3Q8IV08 490 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 PDIK1LQ8N165 341 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 MYO1HQ8N1T3 1032 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 OR11G2Q8NGC1 345 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 MCOLN3Q8TDD5 553 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 MVB12AQ96EY5 273 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 CFAP36Q96G28 342 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 NAPGQ99747 312 aaPredicted RBP21.9■■□□□ 1.1
COL9A3-213ENST00000489045 MESP1Q9BRJ9 268 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 TRIM51Q9BSJ1 452 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 ZBTB20Q9HC78 741 aaPredicted RBP21.9■■□□□ 1.1
COL9A3-213ENST00000489045 PPANQ9NQ55 473 aaKnown RBP21.9■■□□□ 1.1
COL9A3-213ENST00000489045 CDC14AQ9UNH5 594 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 PDE10AQ9Y233 779 aa21.9■■□□□ 1.1
COL9A3-213ENST00000489045 IGLV3-12A0A075B6K2 115 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 H7BY64 318 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 FFAR3O14843 346 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 GPR42O15529 346 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 C8GP07360 202 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 SP140Q13342 867 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 DSG2Q14126 1118 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 PLEKHN1Q494U1 663 aaPredicted RBP21.89■■□□□ 1.09
COL9A3-213ENST00000489045 VWA2Q5GFL6 755 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 GARNL3Q5VVW2 1013 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 GALNT7Q86SF2 657 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 ARHGEF39Q8N4T4 335 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 TM9SF4Q92544 642 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 LINGO1Q96FE5 620 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 VPS50Q96JG6 964 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 CCDC138Q96M89 665 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 RUNDC3BQ96NL0 473 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 PRAP1Q96NZ9 151 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 WDR83Q9BRX9 315 aaKnown RBP21.89■■□□□ 1.09
COL9A3-213ENST00000489045 MAP10Q9P2G4 905 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 TRPC4Q9UBN4 977 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 C3orf18Q9UK00 162 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 B3GNT3Q9Y2A9 372 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 SAR1BQ9Y6B6 198 aa21.89■■□□□ 1.09
COL9A3-213ENST00000489045 USP9YO00507 2555 aaPredicted RBP21.89■■□□□ 1.09
COL9A3-213ENST00000489045 PRPF4O43172 522 aaKnown RBP eCLIP21.88■■□□□ 1.091e-6■■■■□ 25.4
COL9A3-213ENST00000489045 TEDDM1Q5T9Z0 273 aa21.88■■□□□ 1.09
COL9A3-213ENST00000489045 HIBCHQ6NVY1 386 aaPredicted RBP21.88■■□□□ 1.09
COL9A3-213ENST00000489045 PARP9Q8IXQ6 854 aa21.88■■□□□ 1.09
COL9A3-213ENST00000489045 PALM2Q8IXS6 379 aa21.88■■□□□ 1.09
COL9A3-213ENST00000489045 IQCKQ8N0W5 287 aa21.88■■□□□ 1.09
COL9A3-213ENST00000489045 ZADH2Q8N4Q0 377 aa21.88■■□□□ 1.09
COL9A3-213ENST00000489045 AMER3Q8N944 861 aa21.88■■□□□ 1.09
COL9A3-213ENST00000489045 MMABQ96EY8 250 aaPredicted RBP21.88■■□□□ 1.09
COL9A3-213ENST00000489045 YIPF2Q9BWQ6 316 aa21.88■■□□□ 1.09
COL9A3-213ENST00000489045 PARVBQ9HBI1 364 aa21.88■■□□□ 1.09
COL9A3-213ENST00000489045 TMEM184CQ9NVA4 438 aa21.88■■□□□ 1.09
COL9A3-213ENST00000489045 PYCARDQ9ULZ3 195 aa21.88■■□□□ 1.09
COL9A3-213ENST00000489045 ESPL1Q14674 2120 aa21.88■■□□□ 1.09
COL9A3-213ENST00000489045 UTP20O75691 2785 aaKnown RBP21.87■■□□□ 1.09
COL9A3-213ENST00000489045 CYSRT1A8MQ03 144 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 TXNDC9O14530 226 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 TTI1O43156 1089 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 STATHP02808 62 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 ACPPP15309 386 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 ITGA8P53708 1063 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 HIF1AQ16665 826 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 PHKG1Q16816 387 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 IRAK1BP1Q5VVH5 260 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 TRMT10BQ6PF06 316 aaKnown RBP21.87■■□□□ 1.09
COL9A3-213ENST00000489045 AGTRAPQ6RW13 159 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 LAPTM4BQ86VI4 370 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 GPATCH11Q8N954 259 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 ANP32BQ92688 251 aaKnown RBP21.87■■□□□ 1.09
COL9A3-213ENST00000489045 C8orf44Q96CB5 159 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 PDLIM2Q96JY6 352 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms