RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 FURINP09958 794 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 EMP3P54852 163 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 RPS15AP62244 130 aaKnown RBP13.65□□□□□ -0.22
BRCA1-218ENST00000489037 ZNF460Q14592 562 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 SSPNQ14714 243 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 SLC9A5Q14940 896 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 PRMT9Q6P2P2 845 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 TMEM207Q6UWW9 146 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 ADAMTSL2Q86TH1 951 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 CEP97Q8IW35 865 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 OR4N4Q8N0Y3 316 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 TBC1D19Q8N5T2 526 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 CSNK1A1LQ8N752 337 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 NOA1Q8NC60 698 aaKnown RBP13.65□□□□□ -0.22
BRCA1-218ENST00000489037 COL26A1Q96A83 441 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 FKBP10Q96AY3 582 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 FBXL8Q96CD0 374 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 IP6K3Q96PC2 410 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 GPR22Q99680 433 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 SLC25A18Q9H1K4 315 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 ACSS2Q9NR19 701 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 ENAMQ9NRM1 1142 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 ZDHHC18Q9NUE0 388 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 CUEDC1Q9NWM3 386 aaPredicted RBP13.65□□□□□ -0.22
BRCA1-218ENST00000489037 G3BP2Q9UN86 482 aaKnown RBP13.65□□□□□ -0.22
BRCA1-218ENST00000489037 HEMK1Q9Y5R4 338 aaPredicted RBP13.65□□□□□ -0.22
BRCA1-218ENST00000489037 SPTA1P02549 2419 aa13.65□□□□□ -0.22
BRCA1-218ENST00000489037 IGKV1-8A0A0C4DH67 115 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 NPEPPSL1A6NEC2 478 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 CDC7O00311 574 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 PEX12O00623 359 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 HAT1O14929 419 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 RFPL1O75677 317 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 IGHEP01854 428 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 ALBP02768 609 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 OTX2P32243 289 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 RRADP55042 308 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 ATP6V0D1P61421 351 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 NFATC3Q12968 1075 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 IL10RAQ13651 578 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 SLMAPQ14BN4 828 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 NDUFA9Q16795 377 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 GARNL3Q5VVW2 1013 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 SBSNQ6UWP8 590 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 RAPH1Q70E73 1250 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 OVCH1Q7RTY7 1134 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 APLFQ8IW19 511 aaPredicted RBP13.64□□□□□ -0.23
BRCA1-218ENST00000489037 ZNF843Q8N446 348 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 OR56A3Q8NH54 315 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 C9orf43Q8TAL5 461 aaPredicted RBP13.64□□□□□ -0.23
BRCA1-218ENST00000489037 PTERQ96BW5 349 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 THAP11Q96EK4 314 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 FMO2Q99518 471 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 MCMBPQ9BTE3 642 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 SGPP1Q9BX95 441 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 SEMA4CQ9C0C4 833 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 DERL2Q9GZP9 239 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 CAB39LQ9H9S4 337 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 ZNF304Q9HCX3 659 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 DMGDHQ9UI17 866 aaKnown RBP13.64□□□□□ -0.23
BRCA1-218ENST00000489037 TLK1Q9UKI8 766 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 NXT1Q9UKK6 140 aaKnown RBP13.64□□□□□ -0.23
BRCA1-218ENST00000489037 DYRK1BQ9Y463 629 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 OARD1Q9Y530 152 aa13.64□□□□□ -0.23
BRCA1-218ENST00000489037 SCN3AQ9NY46 2000 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 ARGFXA6NJG6 315 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 NRP2O60462 931 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 CCDC166P0CW27 439 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 NPPBP16860 134 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 ITGAXP20702 1163 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 GCGRP47871 477 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 HNMTP50135 292 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 PMS2P54278 862 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 RAB10P61026 200 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 CDKL1Q00532 357 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 NFKB2Q00653 900 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 OCA2Q04671 838 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 CSHL1Q14406 222 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 PRTGQ2VWP7 1150 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 MRPL14Q6P1L8 145 aaKnown RBP13.63□□□□□ -0.23
BRCA1-218ENST00000489037 ZNF605Q86T29 641 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 IFT20Q8IY31 132 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 METTL27Q8N6F8 245 aaPredicted RBP13.63□□□□□ -0.23
BRCA1-218ENST00000489037 CAMKVQ8NCB2 501 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 OR2Y1Q8NGV0 311 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 PYCR2Q96C36 320 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 MVB12AQ96EY5 273 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 VPS50Q96JG6 964 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 OR2A5Q96R48 311 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 CYTH2Q99418 400 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 YIPF2Q9BWQ6 316 aa13.63□□□□□ -0.23
BRCA1-218ENST00000489037 B8ZZF3 427 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 PHGDHO43175 533 aaKnown RBP13.62□□□□□ -0.23
BRCA1-218ENST00000489037 KLF7O75840 302 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-218ENST00000489037 C1QL1O75973 258 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 ONECUT2O95948 504 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 S100BP04271 92 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-218ENST00000489037 CDH1P12830 882 aa13.62□□□□□ -0.23
BRCA1-218ENST00000489037 FBLP22087 321 aaKnown RBP13.62□□□□□ -0.23
BRCA1-218ENST00000489037 CRABP2P29373 138 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms