RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 MRPS2Q9Y399 296 aaKnown RBP17.51■□□□□ 0.39
HDAC6-231ENST00000488905 CSMD2Q7Z408 3487 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 TRAV17A0A0B4J275 112 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 ZNF839A8K0R7 811 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 PCDH17O14917 1159 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 ZG16O60844 167 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 FGGP02679 453 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 SERPINA7P05543 415 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 UQCRHP07919 91 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 ANXA5P08758 320 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 STSP08842 583 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 PKMP14618 531 aaKnown RBP17.5■□□□□ 0.39
HDAC6-231ENST00000488905 PAMP19021 973 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 SLC26A3P40879 764 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 KCNJ1P48048 391 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 TNFSF10P50591 281 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 PNLIPRP1P54315 467 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 PRDX1Q06830 199 aaKnown RBP17.5■□□□□ 0.39
HDAC6-231ENST00000488905 KCNJ11Q14654 390 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 ZRSR2Q15696 482 aaKnown RBP17.5■□□□□ 0.39
HDAC6-231ENST00000488905 KCTD19Q17RG1 926 aaPredicted RBP17.5■□□□□ 0.39
HDAC6-231ENST00000488905 C1QL3Q5VWW1 255 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 CENPUQ71F23 418 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 GAS2L3Q86XJ1 694 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 SLC34A3Q8N130 599 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 ARHGEF39Q8N4T4 335 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 RERGQ96A58 199 aaPredicted RBP17.5■□□□□ 0.39
HDAC6-231ENST00000488905 OR2A5Q96R48 311 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 PKP4Q99569 1192 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 YIPF2Q9BWQ6 316 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 TGIF2Q9GZN2 237 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 DRC3Q9H069 523 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 MKKSQ9NPJ1 570 aaPredicted RBP17.5■□□□□ 0.39
HDAC6-231ENST00000488905 UTP6Q9NYH9 597 aaKnown RBP17.5■□□□□ 0.39
HDAC6-231ENST00000488905 PCYOX1Q9UHG3 505 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 VPS9D1Q9Y2B5 631 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 PCNX1Q96RV3 2341 aa17.5■□□□□ 0.39
HDAC6-231ENST00000488905 FOXS1O43638 330 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 JRKO75564 520 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 BMP10O95393 424 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 SLC16A8O95907 504 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 HEXBP07686 556 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 CELA2AP08217 269 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 HSD17B2P37059 387 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 CLCN7P51798 805 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 TDGF1P3P51864 188 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 ARMC3Q5W041 872 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 ZNF324BQ6AW86 544 aaPredicted RBP17.49■□□□□ 0.39
HDAC6-231ENST00000488905 ZNF470Q6ECI4 717 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 FAAH2Q6GMR7 532 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 RIPOR1Q6ZS17 1223 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 NEK10Q6ZWH5 1172 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 FJX1Q86VR8 437 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 ZC3H7AQ8IWR0 971 aaKnown RBP17.49■□□□□ 0.39
HDAC6-231ENST00000488905 REXO1L1PQ8IX06 675 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 PPFIBP2Q8ND30 876 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 GIMAP7Q8NHV1 300 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 TAAR6Q96RI8 345 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 SLC30A3Q99726 388 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 INTS10Q9NVR2 710 aaKnown RBP17.49■□□□□ 0.39
HDAC6-231ENST00000488905 PLA2G3Q9NZ20 509 aa17.49■□□□□ 0.39
HDAC6-231ENST00000488905 LOC102723996A0A087X1L8 192 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 A0A0A6YYC8 382 aaPredicted RBP17.48■□□□□ 0.39
HDAC6-231ENST00000488905 A0A1B0GUH1 482 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 GOLGA6L6A8MZA4 724 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 I3L1I5 382 aaPredicted RBP17.48■□□□□ 0.39
HDAC6-231ENST00000488905 HAT1O14929 419 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 P2RX6O15547 441 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 AVILO75366 819 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 TERF1P54274 439 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 PCOLCEQ15113 449 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 TTLL9Q3SXZ7 439 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 NEPROQ6NW34 567 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 CASC4Q6P4E1 433 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 ADCK2Q7Z695 626 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 FBXO15Q8NCQ5 510 aaPredicted RBP17.48■□□□□ 0.39
HDAC6-231ENST00000488905 ZNF480Q8WV37 535 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 NR4A3Q92570 626 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 HAS2Q92819 552 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 SAMD15Q9P1V8 674 aa17.48■□□□□ 0.39
HDAC6-231ENST00000488905 FBN2P35556 2912 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 DCHS2Q6V1P9 2916 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 E7ENX8 843 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 SMAPO00193 183 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 TXNDC9O14530 226 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 WFS1O76024 890 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 ITGAMP11215 1152 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 MAGEA6P43360 314 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 VPS41P49754 854 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 EFNA3P52797 238 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 KCNK10P57789 538 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 AP2B1P63010 937 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 ABATP80404 500 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 SARNPP82979 210 aaKnown RBP17.47■□□□□ 0.39
HDAC6-231ENST00000488905 TAP2Q03519 686 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 RELAQ04206 551 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 CUL1Q13616 776 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 TRIP13Q15645 432 aaPredicted RBP17.47■□□□□ 0.39
HDAC6-231ENST00000488905 SYT16Q17RD7 645 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 HIBCHQ6NVY1 386 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms