RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SLC12A9Q9BXP2 914 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 NDE1Q9NXR1 346 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 VGLL3A8MV65 326 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 BTN3A1O00481 513 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 UBXN7O94888 489 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 C8GP07360 202 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 TYRP1P17643 537 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 MAPK9P45984 424 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 SESN3P58005 492 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 CFHR1Q03591 330 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 SP140Q13342 867 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 NXNQ6DKJ4 435 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 SBSNQ6UWP8 590 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 LMNTD1Q8N9Z9 388 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 FBXO15Q8NCQ5 510 aaPredicted RBP18.69■□□□□ 0.58
CCM2-216ENST00000488727 OR4E2Q8NGC2 313 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 LCN9Q8WX39 176 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 RAD51AP1Q96B01 352 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 PPP1R36Q96LQ0 422 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 IL17FQ96PD4 163 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 LRRN3Q9H3W5 708 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 RDH14Q9HBH5 336 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 BATF3Q9NR55 127 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 PDE10AQ9Y233 779 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 COPG1Q9Y678 874 aaKnown RBP18.69■□□□□ 0.58
CCM2-216ENST00000488727 NTN3O00634 580 aaPredicted RBP18.68■□□□□ 0.58
CCM2-216ENST00000488727 CSF2RBP32927 897 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 KCNC1P48547 511 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 CLDN6P56747 220 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 HERVK_113P63132 956 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 GPLD1P80108 840 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 PUM1Q14671 1186 aaKnown RBP eCLIP18.68■□□□□ 0.58
CCM2-216ENST00000488727 TSNQ15631 228 aaKnown RBP18.68■□□□□ 0.58
CCM2-216ENST00000488727 PPP1R3AQ16821 1122 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 MUM1Q2TAK8 710 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 UNC50Q53HI1 259 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 TMEM198Q66K66 360 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 DHRS13Q6UX07 377 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 USP53Q70EK8 1073 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 TMPRSS9Q7Z410 1059 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 PPFIBP2Q8ND30 876 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 OR10G6Q8NH81 332 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 PKP4Q99569 1192 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 ERVK-6Q9BXR3 956 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 SRMSQ9H3Y6 488 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 SYNDIG1Q9H7V2 258 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 S100A14Q9HCY8 104 aa18.68■□□□□ 0.58
CCM2-216ENST00000488727 ATXN7L1Q9ULK2 861 aaPredicted RBP18.68■□□□□ 0.58
CCM2-216ENST00000488727 CCDC189A1A4V9 331 aa18.67■□□□□ 0.58
CCM2-216ENST00000488727 SLC16A5O15375 505 aa18.67■□□□□ 0.58
CCM2-216ENST00000488727 INSM1Q01101 510 aaPredicted RBP18.67■□□□□ 0.58
CCM2-216ENST00000488727 CCNIQ14094 377 aa18.67■□□□□ 0.58
CCM2-216ENST00000488727 TTC23LQ6PF05 361 aa18.67■□□□□ 0.58
CCM2-216ENST00000488727 AMIGO1Q86WK6 493 aa18.67■□□□□ 0.58
CCM2-216ENST00000488727 PHF21BQ96EK2 531 aa18.67■□□□□ 0.58
CCM2-216ENST00000488727 ATOH8Q96SQ7 321 aa18.67■□□□□ 0.58
CCM2-216ENST00000488727 NUDT22Q9BRQ3 303 aa18.67■□□□□ 0.58
CCM2-216ENST00000488727 ABCG4Q9H172 646 aa18.67■□□□□ 0.58
CCM2-216ENST00000488727 PARVBQ9HBI1 364 aa18.67■□□□□ 0.58
CCM2-216ENST00000488727 POMPQ9Y244 141 aa18.67■□□□□ 0.58
CCM2-216ENST00000488727 OR6C74A6NCV1 312 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 BTN3A3O00478 584 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 DUX1O43812 170 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 PDE5AO76074 875 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 PROS1P07225 676 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 MAP4P27816 1152 aaKnown RBP18.66■□□□□ 0.58
CCM2-216ENST00000488727 PKLRP30613 574 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 CAPZBP47756 277 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 NUDT2P50583 147 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 ATP6V0D1P61421 351 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 PPP1CAP62136 330 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 E2F1Q01094 437 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 SQLEQ14534 574 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 MBOAT1Q6ZNC8 495 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 RAB44Q7Z6P3 723 aaPredicted RBP18.66■□□□□ 0.58
CCM2-216ENST00000488727 PGAM4Q8N0Y7 254 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 LINC01555Q8NAE3 123 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 OR9A1PQ8NGU1 263 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 KIAA1191Q96A73 305 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 AHCYL2Q96HN2 611 aaKnown RBP18.66■□□□□ 0.58
CCM2-216ENST00000488727 SERPINI1Q99574 410 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 TNFRSF12AQ9NP84 129 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 TRAF6Q9Y4K3 522 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 OR5K3A6NET4 321 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 ZW10O43264 779 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 KERAO60938 352 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 SLC16A8O95907 504 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 AMD1P17707 334 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 CYP2A7P20853 494 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 SHMT2P34897 504 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 RAB28P51157 221 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 ATP4BP51164 291 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 CLNS1AP54105 237 aaKnown RBP18.66■□□□□ 0.58
CCM2-216ENST00000488727 NAA20P61599 178 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 SQSTM1Q13501 440 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 MAPRE2Q15555 327 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 OR4D1Q15615 310 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 ADGRF3Q8IZF5 1079 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 DSELQ8IZU8 1212 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 MCOLN3Q8TDD5 553 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms