RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ASPSCR1Q9BZE9 553 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 ULBP3Q9BZM4 244 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 CHRNA10Q9GZZ6 450 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 CENPHQ9H3R5 247 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 STARD5Q9NSY2 213 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 DNAJC11Q9NVH1 559 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 ANKMY1Q9P2S6 941 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 PTBP2Q9UKA9 531 aaKnown RBP10.59□□□□□ -0.71
UBE4B-210ENST00000488228 PILRAQ9UKJ1 303 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 PLCL2Q9UPR0 1127 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 NUP210LQ5VU65 1888 aa10.59□□□□□ -0.71
UBE4B-210ENST00000488228 PTPRQQ9UMZ3 2332 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 FEZF1A0PJY2 475 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 CCDC189A1A4V9 331 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 A8MT66 165 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 TARM1B6A8C7 271 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 H3BMH7 237 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 COPEO14579 308 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 MAP2K7O14733 419 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 NVLO15381 856 aaKnown RBP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 RGS16O15492 202 aaPredicted RBP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 P2RX6O15547 441 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 KLK8O60259 260 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 SMIM24O75264 130 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 SPAG7O75391 227 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 SCRG1O75711 98 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 OR2B3O76000 313 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 STK17BO94768 372 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 KIAA0754O94854 1291 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 CAPNS1P04632 268 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 GSTA1P08263 222 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 MSL3P1P0C860 447 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 EZRP15311 586 aaKnown RBP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 EPORP19235 508 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 EEF1DP29692 281 aaKnown RBP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 GGT5P36269 586 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 BCL6P41182 706 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 ALDH18A1P54886 795 aaKnown RBP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 PCBP4P57723 403 aaKnown RBP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 VSX2P58304 361 aaPredicted RBP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 ERVPABLB-1P60509 514 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 CSNK1G2P78368 415 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 REEP5Q00765 189 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 CASP8Q14790 479 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 PDK4Q16654 411 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 LRIG3Q6UXM1 1119 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 MCATQ8IVS2 390 aaKnown RBP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 TMEM151AQ8N4L1 468 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 ZNF655Q8N720 491 aaPredicted RBP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 GALNT6Q8NCL4 622 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 ZNF740Q8NDX6 193 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 ZUFSPQ96AP4 578 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 PHF21BQ96EK2 531 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 NAF1Q96HR8 494 aaKnown RBP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 TEFMQ96QE5 360 aaKnown RBP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 CD244Q9BZW8 370 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 SPRTNQ9H040 489 aaPredicted RBP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 ACSS2Q9NR19 701 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 OPTCQ9UBM4 332 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 DKK4Q9UBT3 224 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 SNX7Q9UNH6 387 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 RAXQ9Y2V3 346 aa10.58□□□□□ -0.72
UBE4B-210ENST00000488228 URB1O60287 2271 aaKnown RBP10.58□□□□□ -0.72
UBE4B-210ENST00000488228 SCN2AQ99250 2005 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 H0YGG7 62 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 K7EPI3 171 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 ZSCAN9O15535 394 aaPredicted RBP10.57□□□□□ -0.72
UBE4B-210ENST00000488228 PRAMEF4O60810 478 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 DLGAP3O95886 979 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 PROCP04070 461 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 NTRK1P04629 796 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 EIF2S1P05198 315 aaKnown RBP10.57□□□□□ -0.72
UBE4B-210ENST00000488228 ATXN8OSP0DMR3 200 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 CREB1P16220 341 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 CRHR1P34998 444 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 CCR8P51685 355 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 ARF3P61204 181 aaPredicted RBP10.57□□□□□ -0.72
UBE4B-210ENST00000488228 SLC18A2Q05940 514 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 SLBPQ14493 270 aaKnown RBP eCLIP10.57□□□□□ -0.72
UBE4B-210ENST00000488228 TGIF1Q15583 401 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 ZC3H12BQ5HYM0 836 aaKnown RBP10.57□□□□□ -0.72
UBE4B-210ENST00000488228 PRAMEF9Q5VWM5 478 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 CYB5D1Q6P9G0 228 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 NXPE4Q6UWF7 544 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 SLCO4C1Q6ZQN7 724 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 RPS27LQ71UM5 84 aaKnown RBP10.57□□□□□ -0.72
UBE4B-210ENST00000488228 VN1R4Q7Z5H5 301 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 LCA5Q86VQ0 697 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 GPR135Q8IZ08 494 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 CNPY4Q8N129 248 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 DTWD1Q8N5C7 304 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 TEX9Q8N6V9 391 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 CSNK1A1LQ8N752 337 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 BANPQ8N9N5 519 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 ABHD11Q8NFV4 315 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 OR8K5Q8NH50 307 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 SNIP1Q8TAD8 396 aaKnown RBP10.57□□□□□ -0.72
UBE4B-210ENST00000488228 CNTNAP3BQ96NU0 1288 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 NSUN5Q96P11 429 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms