RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 TRIM54Q9BYV2 358 aa13.3□□□□□ -0.28
COPS7B-221ENST00000488111 TP63Q9H3D4 680 aaPredicted RBP13.3□□□□□ -0.28
COPS7B-221ENST00000488111 NTN4Q9HB63 628 aa13.3□□□□□ -0.28
COPS7B-221ENST00000488111 LTB4R2Q9NPC1 389 aa13.3□□□□□ -0.28
COPS7B-221ENST00000488111 PMF1-BGLAPU3KQ54 211 aa13.3□□□□□ -0.28
COPS7B-221ENST00000488111 FADS2P1A8MWK0 482 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 M0QX08 132 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 UPK1AO00322 258 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 ALPLP05186 524 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 ACRV1P26436 265 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 CD40LGP29965 261 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 PTPN5P54829 565 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 DGUOKQ16854 277 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 KIF19Q2TAC6 998 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 PAGE2BQ5JRK9 111 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 C6orf141Q5SZD1 244 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 ZNF648Q5T619 568 aaPredicted RBP13.29□□□□□ -0.28
COPS7B-221ENST00000488111 RPS27LQ71UM5 84 aaKnown RBP13.29□□□□□ -0.28
COPS7B-221ENST00000488111 NXPE1Q8N323 547 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 PGBD3Q8N328 593 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 C19orf60Q96EN9 201 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 C3orf30Q96M34 536 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 C19orf43Q9BQ61 176 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 GSTO2Q9H4Y5 243 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 CYP4F12Q9HCS2 524 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 POLE4Q9NR33 117 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 GALPQ9UBC7 116 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 PDE10AQ9Y233 779 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 PRSS21Q9Y6M0 314 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 TRBV5-4A0A0C4DH59 114 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 K7ESM1 405 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 UBFD1O14562 309 aaKnown RBP13.29□□□□□ -0.28
COPS7B-221ENST00000488111 NDUFS2O75306 463 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 PRSS23O95084 383 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 MATN4O95460 622 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 KRT75O95678 551 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 ACADMP11310 421 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 GABRG2P18507 467 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 NR4A2P43354 598 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 SERPINB10P48595 397 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 SUOXP51687 545 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 STARD6P59095 220 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 PHC1P78364 1004 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 TIAL1Q01085 375 aaKnown RBP eCLIP13.29□□□□□ -0.28
COPS7B-221ENST00000488111 GPR33Q49SQ1 333 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 CTSL3PQ5NE16 218 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 HENMT1Q5T8I9 393 aaKnown RBP13.29□□□□□ -0.28
COPS7B-221ENST00000488111 ZDHHC20Q5W0Z9 365 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 CLEC6AQ6EIG7 209 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 RIMKLAQ8IXN7 391 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 OR7A2PQ8NGA2 310 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 CHAC2Q8WUX2 184 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 DTD2Q96FN9 168 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 NECAB3Q96P71 396 aaPredicted RBP13.29□□□□□ -0.28
COPS7B-221ENST00000488111 AARSD1Q9BTE6 412 aaKnown RBP13.29□□□□□ -0.28
COPS7B-221ENST00000488111 CHID1Q9BWS9 393 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 ALG2Q9H553 416 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 AKTIPQ9H8T0 292 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 SLC52A3Q9NQ40 469 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 NECTIN3Q9NQS3 549 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 ZNF229Q9UJW7 825 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 MRPS17Q9Y2R5 130 aaKnown RBP13.29□□□□□ -0.28
COPS7B-221ENST00000488111 TESMINQ9Y4I5 508 aa13.29□□□□□ -0.28
COPS7B-221ENST00000488111 ATP6AP2A0A1C7CYW4 349 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 ISPDA4D126 451 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 UBXN8O00124 270 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 NIPSNAP2O75323 286 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 ATP6AP2O75787 350 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 INMTO95050 263 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 NADKO95544 446 aaPredicted RBP13.28□□□□□ -0.28
COPS7B-221ENST00000488111 HPRP00739 348 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 S100BP04271 92 aaPredicted RBP13.28□□□□□ -0.28
COPS7B-221ENST00000488111 NCK1P16333 377 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 ITGB6P18564 788 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 CHRM3P20309 590 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 PTGER3P43115 390 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 POU4F1Q01851 419 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 TOP3AQ13472 1001 aaPredicted RBP13.28□□□□□ -0.28
COPS7B-221ENST00000488111 FAM83EQ2M2I3 478 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 ZNF284Q2VY69 593 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 OTUD3Q5T2D3 398 aaPredicted RBP13.28□□□□□ -0.28
COPS7B-221ENST00000488111 FAM219BQ5XKK7 198 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 CERS6Q6ZMG9 384 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 USP43Q70EL4 1123 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 MIER2Q8N344 545 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 BIRC7Q96CA5 298 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 NUS1Q96E22 293 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 AURKBQ96GD4 344 aaPredicted RBP13.28□□□□□ -0.28
COPS7B-221ENST00000488111 SHDQ96IW2 340 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 RDH12Q96NR8 316 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 KCTD14Q9BQ13 255 aaPredicted RBP13.28□□□□□ -0.28
COPS7B-221ENST00000488111 TRMOQ9BU70 441 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 FBRSQ9HAH7 460 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 SCN8AQ9UQD0 1980 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 AGAP14A8MT82 685 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 ZNF99A8MXY4 864 aaPredicted RBP13.28□□□□□ -0.28
COPS7B-221ENST00000488111 CENPBD1B2RD01 187 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 TSPAN6O43657 245 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 RHOBTB1O94844 696 aa13.28□□□□□ -0.28
COPS7B-221ENST00000488111 MT-ND1P03886 318 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms