RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SCARB2Q14108 478 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 ZNF648Q5T619 568 aaPredicted RBP11.46□□□□□ -0.57
TRA2B-214ENST00000487615 MFSD4BQ5TF39 518 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 CXorf57Q6NSI4 855 aaKnown RBP11.46□□□□□ -0.57
TRA2B-214ENST00000487615 FAM92BQ6ZTR7 304 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 PDPRQ8NCN5 879 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 OR10G6Q8NH81 332 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 RERGQ96A58 199 aaPredicted RBP11.46□□□□□ -0.57
TRA2B-214ENST00000487615 ISG20Q96AZ6 181 aaKnown RBP11.46□□□□□ -0.57
TRA2B-214ENST00000487615 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRA2B-214ENST00000487615 COQ6Q9Y2Z9 468 aa11.46□□□□□ -0.57
TRA2B-214ENST00000487615 TRIP12Q14669 1992 aaPredicted RBP11.46□□□□□ -0.58
TRA2B-214ENST00000487615 ZNFX1Q9P2E3 1918 aaKnown RBP11.46□□□□□ -0.58
TRA2B-214ENST00000487615 EFCAB10A6NFE3 127 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 SOCS2O14508 198 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 ZNF195O14628 629 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 OR6B1O95007 311 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 ZDHHC11BP0C7U3 371 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 DBTP11182 482 aaKnown RBP11.46□□□□□ -0.58
TRA2B-214ENST00000487615 HSD3B1P14060 373 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 FPR1P21462 350 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 HSD3B2P26439 372 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 ARRB2P32121 409 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 CTSOP43234 321 aaPredicted RBP11.46□□□□□ -0.58
TRA2B-214ENST00000487615 ACVR1Q04771 509 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 C10orf62Q5T681 223 aaPredicted RBP11.46□□□□□ -0.58
TRA2B-214ENST00000487615 GPR153Q6NV75 609 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 NUDT13Q86X67 352 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 BTN2A2Q8WVV5 523 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 PIH1D2Q8WWB5 315 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 S100ZQ8WXG8 99 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 SMPDL3AQ92484 453 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 TOR3AQ9H497 397 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 TAC3Q9UHF0 121 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 RIMS3Q9UJD0 308 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 MYO7AQ13402 2215 aa11.46□□□□□ -0.58
TRA2B-214ENST00000487615 DYRK3O43781 588 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 TIMP1P01033 207 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 TSPAN19P0C672 248 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 ANXA8P13928 327 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 HMGA1P17096 107 aaKnown RBP11.45□□□□□ -0.58
TRA2B-214ENST00000487615 NR4A1P22736 598 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 JAK1P23458 1154 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 CMPK1P30085 196 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 CLCNKAP51800 687 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 ZNF763Q0D2J5 394 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 DOC2AQ14183 400 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 DHCR24Q15392 516 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 MED22Q15528 200 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 INAQ16352 499 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 SMU1Q2TAY7 513 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 TNFAIP8L2Q6P589 184 aaPredicted RBP11.45□□□□□ -0.58
TRA2B-214ENST00000487615 SUSD1Q6UWL2 747 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 TMEM207Q6UWW9 146 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 SLCO6A1Q86UG4 719 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 ARMC8Q8IUR7 673 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 OR8H2Q8N162 312 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 SLC46A2Q9BY10 475 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 SMURF2Q9HAU4 748 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 RDH14Q9HBH5 336 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 EXD2Q9NVH0 621 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 FAM92AA1XBS5 289 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 GRXCR2A6NFK2 248 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 H0YAE9 185 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 UBFD1O14562 309 aaKnown RBP11.45□□□□□ -0.58
TRA2B-214ENST00000487615 ABLIM3O94929 683 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 OPN1SWP03999 348 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 MAT2AP31153 395 aaKnown RBP11.45□□□□□ -0.58
TRA2B-214ENST00000487615 ARMCX4Q5H9R4 360 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 DCUN1D3Q8IWE4 304 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 RAB11FIP5Q9BXF6 653 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 PSME4Q14997 1843 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 LOC100130705A0A1B0GUX0 176 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 TCRBV3S1A0A5B6 114 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 H7C0S8 307 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 NDUFS2O75306 463 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 GADD45GO95257 159 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 GBAP04062 536 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 ARSAP15289 507 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 PRKACGP22612 351 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 CTGFP29279 349 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 NOS3P29474 1203 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 GALK1P51570 392 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 MRPS15P82914 257 aaKnown RBP11.45□□□□□ -0.58
TRA2B-214ENST00000487615 ELAVL3Q14576 367 aaKnown RBP11.45□□□□□ -0.58
TRA2B-214ENST00000487615 PTPRRQ15256 657 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 DCST1Q5T197 706 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 ANKRD26P1Q6NSI1 321 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 P2RY8Q86VZ1 359 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 ZZZ3Q8IYH5 903 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 C10orf53Q8N6V4 93 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 HSH2DQ96JZ2 352 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 SLC38A2Q96QD8 506 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 LINC00597Q9H2U6 94 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 EQTNQ9NQ60 294 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 SPATA7Q9P0W8 599 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 CFAP20Q9Y6A4 193 aaKnown RBP11.45□□□□□ -0.58
TRA2B-214ENST00000487615 H3BNH8 94 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 E2F3O00716 465 aa11.45□□□□□ -0.58
TRA2B-214ENST00000487615 DIRAS1O95057 198 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms