RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 MAP2K7O14733 419 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 ZSCAN9O15535 394 aaPredicted RBP18.74■□□□□ 0.59
SEC22A-208ENST00000487572 KLK10O43240 276 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 ZNF749O43361 778 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 CPNE3O75131 537 aaKnown RBP18.74■□□□□ 0.59
SEC22A-208ENST00000487572 DLGAP3O95886 979 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 MTHFD2P13995 350 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 GGT5P36269 586 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 CCR8P51685 355 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 CSNK1G2P78368 415 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 MEF2AQ02078 507 aaPredicted RBP18.74■□□□□ 0.59
SEC22A-208ENST00000487572 CLN3Q13286 438 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 RASA2Q15283 850 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 ST3GAL2Q16842 350 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 CATSPEREQ5SY80 951 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 C6orf15Q6UXA7 325 aaPredicted RBP18.74■□□□□ 0.59
SEC22A-208ENST00000487572 TMPRSS11BQ86T26 416 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 CACNA2D3Q8IZS8 1091 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 NLGN4XQ8N0W4 816 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 NLGN4YQ8NFZ3 816 aaPredicted RBP18.74■□□□□ 0.59
SEC22A-208ENST00000487572 ZBTB9Q96C00 473 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 MRPL57Q9BQC6 102 aaKnown RBP18.74■□□□□ 0.59
SEC22A-208ENST00000487572 SPRY4Q9C004 299 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 DNAJC11Q9NVH1 559 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 ASB1Q9Y576 335 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 KCNE2Q9Y6J6 123 aa18.74■□□□□ 0.59
SEC22A-208ENST00000487572 FREM2Q5SZK8 3169 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 FEZF1A0PJY2 475 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.73■□□□□ 0.59
SEC22A-208ENST00000487572 H0YGG7 62 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 STATHP02808 62 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 ATXN8OSP0DMR3 200 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 ATP1A2P50993 1020 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 ARF3P61204 181 aaPredicted RBP18.73■□□□□ 0.59
SEC22A-208ENST00000487572 CDC16Q13042 620 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 WASHC2DQ5SRD0 308 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 C16orf46Q6P387 395 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 LRRC69Q6ZNQ3 347 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 VASH2Q86V25 355 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 DTX1Q86Y01 620 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 KLHDC8AQ8IYD2 350 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 RIBC1Q8N443 379 aaPredicted RBP18.73■□□□□ 0.59
SEC22A-208ENST00000487572 SLC38A9Q8NBW4 561 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 NKD1Q969G9 470 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 CD244Q9BZW8 370 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 ROPN1BQ9BZX4 212 aaPredicted RBP18.73■□□□□ 0.59
SEC22A-208ENST00000487572 MRPL46Q9H2W6 279 aaKnown RBP18.73■□□□□ 0.59
SEC22A-208ENST00000487572 SYNPO2LQ9H987 977 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 ROPN1Q9HAT0 212 aaPredicted RBP18.73■□□□□ 0.59
SEC22A-208ENST00000487572 TMEM216Q9P0N5 145 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 PCDHB3Q9Y5E6 796 aa18.73■□□□□ 0.59
SEC22A-208ENST00000487572 SDK2Q58EX2 2172 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 CCDC151A5D8V7 595 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 H3BMH7 237 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 SRPX2O60687 465 aaPredicted RBP18.72■□□□□ 0.59
SEC22A-208ENST00000487572 SMIM24O75264 130 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 GRK3P35626 688 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 ALDH18A1P54886 795 aaKnown RBP18.72■□□□□ 0.59
SEC22A-208ENST00000487572 PDK4Q16654 411 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 KRT71Q3SY84 523 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 TCTE1Q5JU00 501 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 TLDC1Q6P9B6 456 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 NXPE4Q6UWF7 544 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 LRRC70Q7Z2Q7 622 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 SPACA3Q8IXA5 215 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 C4orf33Q8N1A6 199 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 ESX1Q8N693 406 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 IL22RA1Q8N6P7 574 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 PTGR2Q8N8N7 351 aaPredicted RBP18.72■□□□□ 0.59
SEC22A-208ENST00000487572 TTC29Q8NA56 475 aaPredicted RBP18.72■□□□□ 0.59
SEC22A-208ENST00000487572 ABHD11Q8NFV4 315 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 UBTD2Q8WUN7 234 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 RERGQ96A58 199 aaPredicted RBP18.72■□□□□ 0.59
SEC22A-208ENST00000487572 NDC1Q9BTX1 674 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 PELI2Q9HAT8 420 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 OPTCQ9UBM4 332 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 AP1M2Q9Y6Q5 423 aa18.72■□□□□ 0.59
SEC22A-208ENST00000487572 PCM1Q15154 2024 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 LRRC14BA6NHZ5 514 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 CCNYL3P0C7X3 344 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 GNAZP19086 355 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 VARSP26640 1264 aaKnown RBP18.71■□□□□ 0.59
SEC22A-208ENST00000487572 BCL6P41182 706 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 RPS15AP62244 130 aaKnown RBP18.71■□□□□ 0.59
SEC22A-208ENST00000487572 ZNF844Q08AG5 666 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 GPS2Q13227 327 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 SETDB1Q15047 1291 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 C1orf189Q5VU69 101 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 LCA5Q86VQ0 697 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 CSNK1A1LQ8N752 337 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 PHF21BQ96EK2 531 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 ZNF285Q96NJ3 590 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 OR2A5Q96R48 311 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 DPH1Q9BZG8 443 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 SPNS1Q9H2V7 528 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 DHCR7Q9UBM7 475 aaKnown RBP18.71■□□□□ 0.59
SEC22A-208ENST00000487572 DCDC2Q9UHG0 476 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 LGALS13Q9UHV8 139 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 ANGPTL3Q9Y5C1 460 aa18.71■□□□□ 0.59
SEC22A-208ENST00000487572 ACACBO00763 2458 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms