RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 DDX39BQ13838 428 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 VMACQ2NL98 169 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 POM121L1PQ3SYA9 428 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 CCSMST1Q4G0I0 132 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 PRSS36Q5K4E3 855 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 ZCCHC8Q6NZY4 707 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 ERAP2Q6P179 960 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 ERICH5Q6P6B1 374 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 GPR155Q7Z3F1 870 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 ZDHHC21Q8IVQ6 265 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 ZZZ3Q8IYH5 903 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 OR56A3Q8NH54 315 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 FOXJ1Q92949 421 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 AP2M1Q96CW1 435 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 ZSWIM3Q96MP5 696 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 COG8Q96MW5 612 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 SGK2Q9HBY8 427 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 FBXO10Q9UK96 956 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 INSL6Q9Y581 213 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 MAGEB17A8MXT2 336 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 NPC1O15118 1278 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 ABCB7O75027 752 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 FGBP02675 491 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 SRPRAP08240 638 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 IL7RP16871 459 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 PRKACGP22612 351 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 WEE1P30291 646 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 GRSF1Q12849 480 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 DCTN2Q13561 401 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 SPIDRQ14159 915 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 ACOX1Q15067 660 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 SKIV2LQ15477 1246 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 RFX4Q33E94 735 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 C6orf141Q5SZD1 244 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 CPZQ66K79 652 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 ARHGAP22Q7Z5H3 698 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 R3HCC1LQ7Z5L2 792 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 NRSN1Q8IZ57 195 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 ARL10Q8N8L6 244 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 CHDHQ8NE62 594 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 OR13F1Q8NGS4 319 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 PKP4Q99569 1192 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 ADNPQ9H2P0 1102 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 LTB4R2Q9NPC1 389 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 TMEM9Q9P0T7 183 aa17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 TMEFF2Q9UIK5 374 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 HEMK1Q9Y5R4 338 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-207ENST00000486828 LAMA3Q16787 3333 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 LOC100130705A0A1B0GUX0 176 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 ATE1O95260 518 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 KCNK5O95279 499 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 ZNF682O95780 498 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 SLC16A8O95907 504 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 C1QCP02747 245 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 RAD23AP54725 363 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 GABARAPL2P60520 117 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 MLLT1Q03111 559 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 LRRC23Q53EV4 343 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 ZC3H12BQ5HYM0 836 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 TMEM240Q5SV17 173 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 SHQ1Q6PI26 577 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 ZNF621Q6ZSS3 439 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 TMEM26Q6ZUK4 368 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 PARS2Q7L3T8 475 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 DCP2Q8IU60 420 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 OR10Q1Q8NGQ4 319 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 FOPNLQ96NB1 174 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 FANCEQ9HB96 536 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 VNN3Q9NY84 501 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 U3KQV3 271 aa17.38■□□□□ 0.37
PDLIM7-207ENST00000486828 NOTCH4Q99466 2003 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 TRIM64BA6NI03 449 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 PSMD11O00231 422 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 SLC9A3R1O14745 358 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 SCAMP2O15127 329 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 HOXA9P31269 272 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 RAE1P78406 368 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 GRIN2CQ14957 1233 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 MEP1AQ16819 746 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 PSRC1Q6PGN9 363 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 TMEM220Q6QAJ8 160 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 RBM23Q86U06 439 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 CLECL1Q8IZS7 167 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 GABARAPL1Q9H0R8 117 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 IL1RAPQ9NPH3 570 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 CIDEBQ9UHD4 219 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 RPS6KA6Q9UK32 745 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 ERVK-11Q9UQG0 969 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 ITM2BQ9Y287 266 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 ORC6Q9Y5N6 252 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 YY2O15391 372 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 SLC16A6O15403 523 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 ETHE1O95571 254 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 CPSF4O95639 269 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 SEMG1P04279 462 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 CISD3P0C7P0 127 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 LAMP1P11279 417 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 ASMTP46597 345 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 DGKGP49619 791 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 CD47Q08722 323 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms