RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 MRPL47Q9HD33 250 aaKnown RBP14.28□□□□□ -0.12
U2AF1-211ENST00000486519 MKKSQ9NPJ1 570 aaPredicted RBP14.28□□□□□ -0.12
U2AF1-211ENST00000486519 LUC7LQ9NQ29 371 aaKnown RBP14.28□□□□□ -0.12
U2AF1-211ENST00000486519 ZDHHC3Q9NYG2 299 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 LIPGQ9Y5X9 500 aa14.28□□□□□ -0.12
U2AF1-211ENST00000486519 SLC5A10A0PJK1 596 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 H0YGG7 62 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 SLC16A5O15375 505 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 NID1P14543 1247 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 ACVR2AP27037 513 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 ITGA8P53708 1063 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 GPR85P60893 370 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 ARF3P61204 181 aaPredicted RBP14.27□□□□□ -0.13
U2AF1-211ENST00000486519 FKBP15Q5T1M5 1219 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 CDKAL1Q5VV42 579 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 FBXW10Q5XX13 1052 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 FBXO42Q6P3S6 717 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 ZNF585AQ6P3V2 769 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 ANKRD37Q7Z713 158 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 SERPINA9Q86WD7 417 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 C16orf52Q8NHV5 167 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 ZNF830Q96NB3 372 aaPredicted RBP14.27□□□□□ -0.13
U2AF1-211ENST00000486519 ZFYVE21Q9BQ24 234 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 GORASP1Q9BQQ3 440 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 ATG10Q9H0Y0 220 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 TRMT1Q9NXH9 659 aaKnown RBP14.27□□□□□ -0.13
U2AF1-211ENST00000486519 FAM169AQ9Y6X4 670 aa14.27□□□□□ -0.13
U2AF1-211ENST00000486519 PINLYPA6NC86 204 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 ARHGEF33A8MVX0 844 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 CFAP99D6REC4 459 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 S1PR4O95977 384 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 GZMAP12544 262 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 ACRV1P26436 265 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 TYRO3Q06418 890 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 MSLNQ13421 630 aaPredicted RBP14.26□□□□□ -0.13
U2AF1-211ENST00000486519 TAF1AQ15573 450 aaPredicted RBP14.26□□□□□ -0.13
U2AF1-211ENST00000486519 PPP1R2P3Q6NXS1 205 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 ARHGAP11AQ6P4F7 1023 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 SNX20Q7Z614 316 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 P3H2Q8IVL5 708 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 PIANPQ8IYJ0 282 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 LGI4Q8N135 537 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 OR2L8Q8NGY9 312 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 ELMO1Q92556 727 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 ZNF592Q92610 1267 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 ULK4Q96C45 1275 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 APOL2Q9BQE5 337 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 MMP25Q9NPA2 562 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 INTS7Q9NVH2 962 aaKnown RBP14.26□□□□□ -0.13
U2AF1-211ENST00000486519 IP6K2Q9UHH9 426 aa14.26□□□□□ -0.13
U2AF1-211ENST00000486519 TRBV5-4A0A0C4DH59 114 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 SYT5O00445 386 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 LIN7AO14910 233 aaPredicted RBP14.25□□□□□ -0.13
U2AF1-211ENST00000486519 EPOP01588 193 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 STATHP02808 62 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 ZNF140P52738 457 aaPredicted RBP14.25□□□□□ -0.13
U2AF1-211ENST00000486519 PDK2Q15119 407 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 DBN1Q16643 649 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 SLC25A35Q3KQZ1 300 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 KAZNQ674X7 775 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 SLC9A4Q6AI14 798 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 LRRC8BQ6P9F7 803 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 ZNF449Q6P9G9 518 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 PRSS41Q7RTY9 318 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 YTHDF3Q7Z739 585 aaKnown RBP14.25□□□□□ -0.13
U2AF1-211ENST00000486519 HORMAD2Q8N7B1 307 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 LINC01560Q8TB33 94 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 M1APQ8TC57 530 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 TMEM158Q8WZ71 300 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 ISCUQ9H1K1 167 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 IMPACTQ9P2X3 320 aa14.25□□□□□ -0.13
U2AF1-211ENST00000486519 SAE1Q9UBE0 346 aaPredicted RBP14.25□□□□□ -0.13
U2AF1-211ENST00000486519 NCKAP5O14513 1909 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 C3orf70A6NLC5 250 aaPredicted RBP14.24□□□□□ -0.13
U2AF1-211ENST00000486519 LRRC53A6NM62 1247 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 TARM1B6A8C7 271 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 P2RX6O15547 441 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 ARHGEF9O43307 516 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 PEX1O43933 1283 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 SKILP12757 684 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 ITGALP20701 1170 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 KDELR1P24390 212 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 MC4RP32245 332 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 HADHQ16836 314 aaKnown RBP14.24□□□□□ -0.13
U2AF1-211ENST00000486519 CCSMST1Q4G0I0 132 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 MFSD4BQ5TF39 518 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 PAPD4Q6PIY7 484 aaKnown RBP14.24□□□□□ -0.13
U2AF1-211ENST00000486519 B3GNT6Q6ZMB0 384 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 MDGA2Q7Z553 956 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 SLC5A8Q8N695 610 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 POGLUT1Q8NBL1 392 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 OR2L3Q8NG85 312 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 CFAP61Q8NHU2 1237 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 METTL21AQ8WXB1 218 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 KIAA1191Q96A73 305 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 ZUFSPQ96AP4 578 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 BDH2Q9BUT1 245 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 CNPPD1Q9BV87 410 aa14.24□□□□□ -0.13
U2AF1-211ENST00000486519 TRIM45Q9H8W5 580 aaPredicted RBP14.24□□□□□ -0.13
U2AF1-211ENST00000486519 VPS37BQ9H9H4 285 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms