RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 SUN1O94901 812 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 CYC1P08574 325 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 RPA3P35244 121 aaPredicted RBP15.33■□□□□ 0.04
PDE6D-205ENST00000486044 FDFT1P37268 417 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 NDUFA9Q16795 377 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 CCSMST1Q4G0I0 132 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 SPNS3Q6ZMD2 512 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 LDB1Q86U70 411 aaPredicted RBP15.33■□□□□ 0.04
PDE6D-205ENST00000486044 SPPL2CQ8IUH8 684 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 MPP5Q8N3R9 675 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 PPHLN1Q8NEY8 458 aaKnown RBP15.33■□□□□ 0.04
PDE6D-205ENST00000486044 SLC35B2Q8TB61 432 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 ADAMTS18Q8TE60 1221 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 SMPDL3AQ92484 453 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 ETNK1Q9HBU6 452 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 C19orf25Q9UFG5 118 aaPredicted RBP15.33■□□□□ 0.04
PDE6D-205ENST00000486044 RUVBL2Q9Y230 463 aaKnown RBP15.33■□□□□ 0.04
PDE6D-205ENST00000486044 TCAF1Q9Y4C2 921 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 MED13LQ71F56 2210 aa15.33■□□□□ 0.04
PDE6D-205ENST00000486044 FAM227AF5H4B4 570 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 CCNDBP1O95273 360 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 EZRP15311 586 aaKnown RBP15.32■□□□□ 0.04
PDE6D-205ENST00000486044 HSD17B2P37059 387 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 AVPR1BP47901 424 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 PMP22Q01453 160 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 ALDH6A1Q02252 535 aaKnown RBP15.32■□□□□ 0.04
PDE6D-205ENST00000486044 RELAQ04206 551 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 FAM53BQ14153 422 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 FASTKQ14296 549 aaKnown RBP15.32■□□□□ 0.04
PDE6D-205ENST00000486044 ARHGAP19Q14CB8 494 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 HKDC1Q2TB90 917 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 BTBD16Q32M84 506 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 ANKRD20A4Q4UJ75 823 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 ACER2Q5QJU3 275 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 PLAG1Q6DJT9 500 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 Q6ZPB1 254 aaPredicted RBP15.32■□□□□ 0.04
PDE6D-205ENST00000486044 TC2NQ8N9U0 490 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 OR9A1PQ8NGU1 263 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 GPR137Q96N19 417 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 SPOCK3Q9BQ16 436 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 P2RY12Q9H244 342 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 AMFRQ9UKV5 643 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 ZNF835Q9Y2P0 537 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 MEMO1Q9Y316 297 aa15.32■□□□□ 0.04
PDE6D-205ENST00000486044 NCOA6Q14686 2063 aaPredicted RBP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 A0A0A6YYC8 382 aaPredicted RBP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 ZNF839A8K0R7 811 aa15.31■□□□□ 0.04
PDE6D-205ENST00000486044 BTNL10A8MVZ5 291 aa15.31■□□□□ 0.04
PDE6D-205ENST00000486044 I3L1I5 382 aaPredicted RBP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 FOXS1O43638 330 aa15.31■□□□□ 0.04
PDE6D-205ENST00000486044 MATN4O95460 622 aa15.31■□□□□ 0.04
PDE6D-205ENST00000486044 CD46P15529 392 aa15.31■□□□□ 0.04
PDE6D-205ENST00000486044 RPS3P23396 243 aaKnown RBP eCLIP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 EEF1DP29692 281 aaKnown RBP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 YBX1P67809 324 aaKnown RBP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 KLF1Q13351 362 aaPredicted RBP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 PEX26Q7Z412 305 aa15.31■□□□□ 0.04
PDE6D-205ENST00000486044 CPEB2Q7Z5Q1 589 aaKnown RBP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 CDH24Q86UP0 819 aa15.31■□□□□ 0.04
PDE6D-205ENST00000486044 PAQR7Q86WK9 346 aa15.31■□□□□ 0.04
PDE6D-205ENST00000486044 ZC3H7AQ8IWR0 971 aaKnown RBP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 EID3Q8N140 333 aa15.31■□□□□ 0.04
PDE6D-205ENST00000486044 HORMAD2Q8N7B1 307 aa15.31■□□□□ 0.04
PDE6D-205ENST00000486044 FAM98AQ8NCA5 519 aaKnown RBP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 OR2A5Q96R48 311 aa15.31■□□□□ 0.04
PDE6D-205ENST00000486044 UTP23Q9BRU9 249 aaKnown RBP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 FAM114A2Q9NRY5 505 aa15.31■□□□□ 0.04
PDE6D-205ENST00000486044 MARCH4Q9P2E8 410 aaPredicted RBP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 R3HDM2Q9Y2K5 976 aaKnown RBP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 EPN1Q9Y6I3 576 aaPredicted RBP15.31■□□□□ 0.04
PDE6D-205ENST00000486044 DUSP10Q9Y6W6 482 aa15.31■□□□□ 0.04
PDE6D-205ENST00000486044 KRT87PA6NCN2 255 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 MIF4GDA9UHW6 222 aaKnown RBP15.3■□□□□ 0.04
PDE6D-205ENST00000486044 H0YIG0 161 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 H3BMM5 538 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 PFDN6O15212 129 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 FANCGO15287 622 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 SEC24DO94855 1032 aaPredicted RBP15.3■□□□□ 0.04
PDE6D-205ENST00000486044 ERGP11308 486 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 ATP5DP30049 168 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 GRIA1P42261 906 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 KIR3DL1P43629 444 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 EIF3BP55884 814 aaKnown RBP15.3■□□□□ 0.04
PDE6D-205ENST00000486044 PRDX1Q06830 199 aaKnown RBP15.3■□□□□ 0.04
PDE6D-205ENST00000486044 TSTA3Q13630 321 aaPredicted RBP15.3■□□□□ 0.04
PDE6D-205ENST00000486044 TESK1Q15569 626 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 MEP1AQ16819 746 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 SYT16Q17RD7 645 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 KRTAP21-3Q3LHN1 58 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 PCID2Q5JVF3 399 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 MFSD4BQ5TF39 518 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 H3F3CQ6NXT2 135 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 SUSD1Q6UWL2 747 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 BEST3Q8N1M1 668 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 TMEM178AQ8NBL3 297 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 MCOLN3Q8TDD5 553 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 CYTH2Q99418 400 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 EBNA1BP2Q99848 306 aaKnown RBP15.3■□□□□ 0.04
PDE6D-205ENST00000486044 KCNK13Q9HB14 408 aa15.3■□□□□ 0.04
PDE6D-205ENST00000486044 MCCC2Q9HCC0 563 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms