RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 EFHD1Q9BUP0 239 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 CD244Q9BZW8 370 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 FAM117AQ9C073 453 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 TWSG1Q9GZX9 223 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 EHD1Q9H4M9 534 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 PRORYQ9H606 182 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 PCMTD2Q9NV79 361 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 DNAJC11Q9NVH1 559 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 CPSF2Q9P2I0 782 aaKnown RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 OPTCQ9UBM4 332 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 LGALS13Q9UHV8 139 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 PTBP2Q9UKA9 531 aaKnown RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 SRPK3Q9UPE1 567 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 STK38LQ9Y2H1 464 aa7.95□□□□□ -1.14
SF3A1-208ENST00000485618 HELZ2Q9BYK8 2649 aaKnown RBP7.95□□□□□ -1.14
SF3A1-208ENST00000485618 ANKRD12Q6UB98 2062 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 URADA6NGE7 173 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 TMEM150CB9EJG8 249 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 H3BQF6 201 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 STX16-NPEPL1H3BU86 382 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 H7BY64 318 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 K7EPI3 171 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 STX16O14662 325 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 MAP2K7O14733 419 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 BRINP1O60477 761 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 CCNT2O60583 730 aaKnown RBP7.94□□□□□ -1.14
SF3A1-208ENST00000485618 C1QL1O75973 258 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 EBLN1P0CF75 366 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 MYL2P10916 166 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 FGF5P12034 268 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 CCL4P13236 92 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 FOLR1P15328 257 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 MAGP20916 626 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 AGXTP21549 392 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 GCAP28676 217 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 SERPINB1P30740 379 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 PDX1P52945 283 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 EMP3P54852 163 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 PCBP4P57723 403 aaKnown RBP7.94□□□□□ -1.14
SF3A1-208ENST00000485618 PPP1CAP62136 330 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 CDC16Q13042 620 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 NAA30Q147X3 362 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-208ENST00000485618 NDUFA9Q16795 377 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 PFKFB4Q16877 469 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 TBC1D25Q3MII6 688 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 CFAP157Q5JU67 520 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 BEND6Q5SZJ8 279 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-208ENST00000485618 CEP85LQ5SZL2 805 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 UBAP2Q5T6F2 1119 aaKnown RBP7.94□□□□□ -1.14
SF3A1-208ENST00000485618 KIAA1614Q5VZ46 1190 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 CLEC14AQ86T13 490 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 TMEM126BQ8IUX1 230 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 LURAP1LQ8IV03 231 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 KLHDC8AQ8IYD2 350 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 CENPLQ8N0S6 344 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-208ENST00000485618 DNAJC22Q8N4W6 341 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 ESX1Q8N693 406 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 TTC29Q8NA56 475 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-208ENST00000485618 CAMKVQ8NCB2 501 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 PPFIBP2Q8ND30 876 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 ABHD11Q8NFV4 315 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 SNIP1Q8TAD8 396 aaKnown RBP7.94□□□□□ -1.14
SF3A1-208ENST00000485618 ATP6V1E2Q96A05 226 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 KIAA1143Q96AT1 154 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-208ENST00000485618 PTERQ96BW5 349 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 REPS1Q96D71 796 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 PGM2Q96G03 612 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 PRAP1Q96NZ9 151 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 ATOH8Q96SQ7 321 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 ZFYVE21Q9BQ24 234 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 DPH1Q9BZG8 443 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 ULBP3Q9BZM4 244 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 DRC3Q9H069 523 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 PELI2Q9HAT8 420 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 TXLNGQ9NUQ3 528 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 OCIAD1Q9NX40 245 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 EURLQ9NYK6 297 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 ADGRE2Q9UHX3 823 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 PADI1Q9ULC6 663 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 CDC14AQ9UNH5 594 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 SLC22A14Q9Y267 594 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 LAMA5O15230 3695 aa7.94□□□□□ -1.14
SF3A1-208ENST00000485618 KCNE1BA0A087WTH5 132 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 A0A1W2PPV9 198 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 TRBC2A0A5B9 178 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 GOLGA8RI6L899 631 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 UBXN8O00124 270 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 TK2O00142 265 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 ZSCAN9O15535 394 aaPredicted RBP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 PRPF4O43172 522 aaKnown RBP eCLIP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 UGDHO60701 494 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 CPNE3O75131 537 aaKnown RBP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 SCRG1O75711 98 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 MLYCDO95822 493 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 SLC35G6P0C7Q6 338 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 C1GALT1C1LP0DN25 315 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 HGFP14210 728 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 PVRP15151 417 aa7.93□□□□□ -1.14
SF3A1-208ENST00000485618 ATP5F1P24539 256 aaPredicted RBP7.93□□□□□ -1.14
SF3A1-208ENST00000485618 SLC5A2P31639 672 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms