RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	MS4A14	Q96JA4	679 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	CNDP1	Q96KN2	507 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	WDR77	Q9BQA1	342 aa	Predicted RBP	10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	CRB3	Q9BUF7	120 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	SLC26A1	Q9H2B4	701 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF304	Q9HCX3	659 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	MRPS30	Q9NP92	439 aa	Known RBP	10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	FBXO6	Q9NRD1	293 aa	Predicted RBP	10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	SPATA7	Q9P0W8	599 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZKSCAN5	Q9Y2L8	839 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550	FAM169A	Q9Y6X4	670 aa		10.08	□□□□□ -0.8
HMGN1-215	ENST00000485550		A0A1B0GUH1	482 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	OR2A25	A4D2G3	310 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	CTAGE9	A4FU28	777 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	FITM1	A5D6W6	292 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	VSTM2B	A6NLU5	285 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550		H0YGG7	62 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550		H3BMM5	538 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	KLHL41	O60662	606 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	FKBP9	O95302	570 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	MATN4	O95460	622 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	SYF2	O95926	243 aa	Known RBP	10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZGLP1	P0C6A0	271 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	COX6B1	P14854	86 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	OGN	P20774	298 aa	Known RBP	10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	RPA3	P35244	121 aa	Predicted RBP	10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	PTGER4	P35408	488 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	ARF3	P61204	181 aa	Predicted RBP	10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	SARNP	P82979	210 aa	Known RBP	10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	OCA2	Q04671	838 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	KLC1	Q07866	573 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550		Q0VFX4	171 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	CDC16	Q13042	620 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	ART3	Q13508	389 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	CUL1	Q13616	776 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	THOC5	Q13769	683 aa	Known RBP	10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	DHX34	Q14147	1143 aa	Known RBP	10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	GBX1	Q14549	363 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	TESK1	Q15569	626 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	TUBB8	Q3ZCM7	444 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	RNF187	Q5TA31	235 aa	Predicted RBP	10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	IRAK1BP1	Q5VVH5	260 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF470	Q6ECI4	717 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	FAAH2	Q6GMR7	532 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	LINC00696	Q6ZRV3	163 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	RNF44	Q7L0R7	432 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	CAND1	Q86VP6	1230 aa	Known RBP	10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	CILP2	Q8IUL8	1156 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	DENND6A	Q8IWF6	608 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	LRRC8A	Q8IWT6	810 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	REXO1L1P	Q8IX06	675 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	AMER2	Q8N7J2	671 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	OR11G2	Q8NGC1	345 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	HMGCLL1	Q8TB92	370 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	SMPDL3A	Q92484	453 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	MAGOHB	Q96A72	148 aa	Known RBP	10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF669	Q96BR6	464 aa	Predicted RBP	10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	CABS1	Q96KC9	395 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	TCF12	Q99081	682 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	PKP4	Q99569	1192 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZFYVE21	Q9BQ24	234 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	WDR54	Q9H977	334 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	SYNPO2L	Q9H987	977 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF160	Q9HCG1	818 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	SEMA3G	Q9NS98	782 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	HOMER3	Q9NSC5	361 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	SAMD15	Q9P1V8	674 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	TAC3	Q9UHF0	121 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	C3orf18	Q9UK00	162 aa		10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	NXT1	Q9UKK6	140 aa	Known RBP	10.07	□□□□□ -0.8
HMGN1-215	ENST00000485550	IGKV1-8	A0A0C4DH67	115 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	SDR42E2	A6NKP2	422 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	PSIP1	O75475	530 aa	Known RBP	10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	USP1	O94782	785 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	KLHL18	O94889	574 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	STATH	P02808	62 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	CAT	P04040	527 aa	Known RBP	10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	PAM	P19021	973 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	FBL	P22087	321 aa	Known RBP	10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	HTR1E	P28566	365 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	CLCN7	P51798	805 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	PNLIPRP1	P54315	467 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	KCNK10	P57789	538 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	KRTAP10-9	P60411	292 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	CCZ1B	P86790	482 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	CCZ1	P86791	482 aa	Predicted RBP	10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	MUM1	Q2TAK8	710 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	HKDC1	Q2TB90	917 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	AGAP7P	Q5VUJ5	663 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF662	Q6ZS27	426 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	ADCK2	Q7Z695	626 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	PLD3	Q8IV08	490 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	CATSPER1	Q8NEC5	780 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	GIMAP7	Q8NHV1	300 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	PPP4R1	Q8TF05	950 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	NACC2	Q96BF6	587 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	C10orf90	Q96M02	699 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	AGAP4	Q96P64	663 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	PLCD4	Q9BRC7	762 aa		10.06	□□□□□ -0.8
HMGN1-215	ENST00000485550	TRIM8	Q9BZR9	551 aa		10.06	□□□□□ -0.8

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