RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 CSNK1G2P78368 415 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 DNASE1L3Q13609 305 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 FAM83EQ2M2I3 478 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 SULT1C3Q6IMI6 304 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 FRMPD2BQ6IN97 320 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 ADGRD1Q6QNK2 874 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 C19orf48Q6RUI8 117 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 FAM198BQ6UWH4 519 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 TIFABQ6ZNK6 161 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 GPR155Q7Z3F1 870 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 SPATA6LQ8N4H0 392 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 ARHGEF39Q8N4T4 335 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 ZNF655Q8N720 491 aaPredicted RBP15.2■□□□□ 0.02
UPF3A-208ENST00000484246 OR4K1Q8NGD4 311 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 CT55Q8WUE5 264 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 MTBPQ96DY7 904 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 CLIP3Q96DZ5 547 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 MRRFQ96E11 262 aaKnown RBP15.2■□□□□ 0.02
UPF3A-208ENST00000484246 CRELD1Q96HD1 420 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 C17orf62Q9BQA9 187 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 NDC1Q9BTX1 674 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 PPCSQ9HAB8 311 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 NUDT4Q9NZJ9 180 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 TLK1Q9UKI8 766 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 SH2B3Q9UQQ2 575 aa15.2■□□□□ 0.02
UPF3A-208ENST00000484246 PTPRQQ9UMZ3 2332 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 A0A0J9YVX5 310 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 ZNF891A8MT65 544 aaPredicted RBP15.19■□□□□ 0.02
UPF3A-208ENST00000484246 POC1B-GALNT4F8VUJ3 575 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 HAT1O14929 419 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 KLHL2O95198 593 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 CAPN1P07384 714 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 SNRPAP09012 282 aaKnown RBP15.19■□□□□ 0.02
UPF3A-208ENST00000484246 COL6A2P12110 1019 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 F8A1P23610 371 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 DLSTP36957 453 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 RPS15AP62244 130 aaKnown RBP15.19■□□□□ 0.02
UPF3A-208ENST00000484246 VSNL1P62760 191 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 CXADRP78310 365 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 MC1RQ01726 317 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 SLC29A2Q14542 456 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 ACAP2Q15057 778 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 RASA2Q15283 850 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 LGSNQ5TDP6 509 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 GARNL3Q5VVW2 1013 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 TTC29Q8NA56 475 aaPredicted RBP15.19■□□□□ 0.02
UPF3A-208ENST00000484246 ZSCAN1Q8NBB4 408 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 UHMK1Q8TAS1 419 aaKnown RBP15.19■□□□□ 0.02
UPF3A-208ENST00000484246 UBTD2Q8WUN7 234 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 KCTD4Q8WVF5 259 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 STARD8Q92502 1023 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 PYCR2Q96C36 320 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 GPR78Q96P69 363 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 EGFL8Q99944 293 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 TMEM79Q9BSE2 394 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 CHST8Q9H2A9 424 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 SYNPO2LQ9H987 977 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 CNOT10Q9H9A5 744 aaKnown RBP15.19■□□□□ 0.02
UPF3A-208ENST00000484246 GPRC5BQ9NZH0 403 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 PTBP2Q9UKA9 531 aaKnown RBP15.19■□□□□ 0.02
UPF3A-208ENST00000484246 LHX6Q9UPM6 363 aa15.19■□□□□ 0.02
UPF3A-208ENST00000484246 LOC105369274A0A096LPK9 316 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 LOC102723532A0A0G2JNH3 316 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 A0A1B0GX78 115 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 SYCE1LA8MT33 242 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 H0YGG7 62 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 H7BY64 318 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 TXNDC9O14530 226 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 DSCR3O14972 297 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 CDH1P12830 882 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 AGXTP21549 392 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 GMPRP36959 345 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 CCR8P51685 355 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 VSX2P58304 361 aaPredicted RBP15.18■□□□□ 0.02
UPF3A-208ENST00000484246 ARF3P61204 181 aaPredicted RBP15.18■□□□□ 0.02
UPF3A-208ENST00000484246 IRF9Q00978 393 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 FAM214AQ32MH5 1076 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 WASHC2DQ5SRD0 308 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 EMBQ6PCB8 327 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 ADCK2Q7Z695 626 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 LCA5Q86VQ0 697 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 THOC6Q86W42 341 aaKnown RBP15.18■□□□□ 0.02
UPF3A-208ENST00000484246 OR4N4Q8N0Y3 316 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 CSNK1A1LQ8N752 337 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 SLC5A11Q8WWX8 675 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 MR1Q95460 341 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 NXNL1Q96CM4 212 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 MVB12AQ96EY5 273 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 CABS1Q96KC9 395 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 PRAP1Q96NZ9 151 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 NLNQ9BYT8 704 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 UNKQ9C0B0 810 aaKnown RBP15.18■□□□□ 0.02
UPF3A-208ENST00000484246 SLC7A5P2Q9GIP4 190 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 ALG9Q9H6U8 611 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 AKIRIN1Q9H9L7 192 aaPredicted RBP15.18■□□□□ 0.02
UPF3A-208ENST00000484246 PELI2Q9HAT8 420 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 CUTCQ9NTM9 273 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 TXLNGQ9NUQ3 528 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 PSMC3IPQ9P2W1 217 aaPredicted RBP15.18■□□□□ 0.02
UPF3A-208ENST00000484246 IL17BQ9UHF5 180 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms