RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ACACAQ13085 2346 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 FAM221BA6H8Z2 402 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 TMEM233B4DJY2 109 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 BRINP1O60477 761 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 KATNA1O75449 491 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 ESRRBO95718 433 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 GUCA1CO95843 209 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 OTCP00480 354 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 TSPAN8P19075 237 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 KELP23276 732 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 MAP4P27816 1152 aaKnown RBP6.72□□□□□ -1.33
BRCA1-216ENST00000484087 PIK3R1P27986 724 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 HNRNPH1P31943 449 aaKnown RBP6.72□□□□□ -1.33
BRCA1-216ENST00000484087 ATP4BP51164 291 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 CCNG1P51959 295 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 OR1D5P58170 312 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 SH3BP2P78314 561 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 HSPA14Q0VDF9 509 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 ILF3Q12906 894 aaKnown RBP eCLIP6.72□□□□□ -1.33
BRCA1-216ENST00000484087 STX5Q13190 355 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 SP140Q13342 867 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 ART3Q13508 389 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 BOP1Q14137 746 aaKnown RBP6.72□□□□□ -1.33
BRCA1-216ENST00000484087 RPS6KA2Q15349 733 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 AMZ1Q400G9 498 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 MMEL1Q495T6 779 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 C14orf28Q4W4Y0 310 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 CDCP2Q5VXM1 449 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 KANK2Q63ZY3 851 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 CLEC6AQ6EIG7 209 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 SBSNQ6UWP8 590 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 C16orf89Q6UX73 402 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 GPRIN3Q6ZVF9 776 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 NEK10Q6ZWH5 1172 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 UBE2R2Q712K3 238 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-216ENST00000484087 RPS27LQ71UM5 84 aaKnown RBP6.72□□□□□ -1.33
BRCA1-216ENST00000484087 ADGRG6Q86SQ4 1221 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 TMPRSS12Q86WS5 348 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 PROSER1Q86XN7 944 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 GALNT13Q8IUC8 556 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 ZNF547Q8IVP9 402 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 SCUBE1Q8IWY4 988 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 GALNT15Q8N3T1 639 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 DCBLD1Q8N8Z6 715 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 RCBTB1Q8NDN9 531 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 RBM15BQ8NDT2 890 aaKnown RBP6.72□□□□□ -1.33
BRCA1-216ENST00000484087 LKAAEAR1Q8TD35 194 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 GPBAR1Q8TDU6 330 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 SLC37A2Q8TED4 501 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 AGAP11Q8TF27 550 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 ZDHHC1Q8WTX9 485 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 TWIST2Q8WVJ9 160 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 ELMO1Q92556 727 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 STMN2Q93045 179 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 GLYATL1Q969I3 302 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 FOPNLQ96NB1 174 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 ZNF382Q96SR6 550 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 SERPINI1Q99574 410 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 NUDT22Q9BRQ3 303 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 THTPAQ9BU02 230 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 CADM1Q9BY67 442 aaKnown RBP6.72□□□□□ -1.33
BRCA1-216ENST00000484087 ABCG4Q9H172 646 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 OSGEPL1Q9H4B0 414 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 CCDC86Q9H6F5 360 aaKnown RBP6.72□□□□□ -1.33
BRCA1-216ENST00000484087 EFCAB1Q9HAE3 211 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 ZBTB26Q9HCK0 441 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 SCHIP1Q9P0W5 487 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-216ENST00000484087 GMPR2Q9P2T1 348 aaKnown RBP6.72□□□□□ -1.33
BRCA1-216ENST00000484087 LRIT1Q9P2V4 623 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 OPTCQ9UBM4 332 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 TBC1D29Q9UFV1 150 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 PCTPQ9UKL6 214 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 IKZF3Q9UKT9 509 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 SATB2Q9UPW6 733 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 ENTPD2Q9Y5L3 495 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 AK5Q9Y6K8 562 aa6.72□□□□□ -1.33
BRCA1-216ENST00000484087 MGAQ8IWI9 3026 aa6.71□□□□□ -1.33
BRCA1-216ENST00000484087 ATMQ13315 3056 aa6.71□□□□□ -1.33
BRCA1-216ENST00000484087 KNTC1P50748 2209 aa6.71□□□□□ -1.33
BRCA1-216ENST00000484087 CHD6Q8TD26 2715 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 PIKFYVEQ9Y2I7 2098 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 LOC100653049A0A140TA62 436 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 OR2AG2A6NM03 316 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 K7EPI3 171 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 E2F3O00716 465 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 UBFD1O14562 309 aaKnown RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 TOR1BO14657 336 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 TNFRSF10CO14798 259 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 PPM1DO15297 605 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 NUAK1O60285 661 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 CCNT2O60583 730 aaKnown RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 KRT34O76011 436 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 HOXC4P09017 264 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 GSTM1P09488 218 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 EPB42P16452 691 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 LBPP18428 481 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 ITIH1P19827 911 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 CCND1P24385 295 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 RPL10P27635 214 aaKnown RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 ITPKBP27987 946 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms