RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 ACSL3O95573 720 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 GUCA1CO95843 209 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 SLC35E2BP0CK96 405 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 CCDC166P0CW27 439 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 PRKAR1AP10644 381 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 CRABP2P29373 138 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 HNMTP50135 292 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 UGT8Q16880 541 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 FAM214AQ32MH5 1076 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 NKAIN1Q4KMZ8 207 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 CDKL4Q5MAI5 379 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 C1orf189Q5VU69 101 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 BORAQ6PGQ7 559 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 C17orf64Q86WR6 236 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 KLHDC8AQ8IYD2 350 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 ARHGEF39Q8N4T4 335 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 ABHD11Q8NFV4 315 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 EXTL1Q92935 676 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 PRAP1Q96NZ9 151 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 OR4K3Q96R72 315 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 SARGQ9BW04 601 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 STARD5Q9NSY2 213 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 TCFL5Q9UL49 500 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 CFAP46Q8IYW2 2715 aa17.2■□□□□ 0.34
HDAC6-225ENST00000483506 TLN1Q9Y490 2541 aaKnown RBP17.19■□□□□ 0.34
HDAC6-225ENST00000483506 HYKKA2RU49 373 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 KLF7O75840 302 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-225ENST00000483506 ANXA5P08758 320 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 CD63P08962 238 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 FURINP09958 794 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 RPS15AP62244 130 aaKnown RBP17.19■□□□□ 0.34
HDAC6-225ENST00000483506 RPS18P62269 152 aaKnown RBP17.19■□□□□ 0.34
HDAC6-225ENST00000483506 CSNK1G2P78368 415 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 NFKB2Q00653 900 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 ERV3-1Q14264 604 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 TGFBIQ15582 683 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 TAF1BQ53T94 588 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-225ENST00000483506 ATP1A1-AS1Q5TC04 95 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 MRPL14Q6P1L8 145 aaKnown RBP17.19■□□□□ 0.34
HDAC6-225ENST00000483506 C16orf46Q6P387 395 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 TTLL10Q6ZVT0 673 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 CMC1Q7Z7K0 106 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 EIF1ADQ8N9N8 165 aaKnown RBP17.19■□□□□ 0.34
HDAC6-225ENST00000483506 OR4K1Q8NGD4 311 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 ADAMTS17Q8TE56 1095 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 SLC44A1Q8WWI5 657 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 KIAA1191Q96A73 305 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 FKBP10Q96AY3 582 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 PYCR2Q96C36 320 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 RHBDF1Q96CC6 855 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 THAP11Q96EK4 314 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 C10orf90Q96M02 699 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 SLC22A11Q9NSA0 550 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 ABCF3Q9NUQ8 709 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 POLHQ9Y253 713 aa17.19■□□□□ 0.34
HDAC6-225ENST00000483506 BSNQ9UPA5 3926 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 TXNDC9O14530 226 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 MED26O95402 600 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 ALBP02768 609 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 ABHD2P08910 425 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 RHOXF2BP0C7M4 288 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 SLC6A12P48065 614 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 IL10RAQ13651 578 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 MUM1Q2TAK8 710 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 GARNL3Q5VVW2 1013 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 FRA10AC1Q70Z53 315 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 ADCK2Q7Z695 626 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 CSNK1A1LQ8N752 337 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 SLC39A7Q92504 469 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 ISL2Q96A47 359 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 PTERQ96BW5 349 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 RHOXF2Q9BQY4 288 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 TXLNGYQ9BZA5 131 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 SLC26A1Q9H2B4 701 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 PADI2Q9Y2J8 665 aa17.18■□□□□ 0.34
HDAC6-225ENST00000483506 COL6A6A6NMZ7 2263 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 CCDC189A1A4V9 331 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 ZNF500O60304 480 aaPredicted RBP17.17■□□□□ 0.34
HDAC6-225ENST00000483506 PIM1P11309 404 aaPredicted RBP17.17■□□□□ 0.34
HDAC6-225ENST00000483506 CDH1P12830 882 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 GGT5P36269 586 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 DLG1Q12959 904 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 CSHL1Q14406 222 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 OR4D1Q15615 310 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 MROH9Q5TGP6 573 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 PRMT9Q6P2P2 845 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 COX15Q7KZN9 410 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 TRMT10CQ7L0Y3 403 aaKnown RBP17.17■□□□□ 0.34
HDAC6-225ENST00000483506 VN1R4Q7Z5H5 301 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 TCAIMQ8N3R3 496 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 SPATA6LQ8N4H0 392 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 EXD3Q8N9H8 876 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 PDPRQ8NCN5 879 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 THAP4Q8WY91 577 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 RERGQ96A58 199 aaPredicted RBP17.17■□□□□ 0.34
HDAC6-225ENST00000483506 MVB12AQ96EY5 273 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 UNKQ9C0B0 810 aaKnown RBP17.17■□□□□ 0.34
HDAC6-225ENST00000483506 ADNPQ9H2P0 1102 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 WDR54Q9H977 334 aa17.17■□□□□ 0.34
HDAC6-225ENST00000483506 SNX15Q9NRS6 342 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms