RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 VPS35Q96QK1 796 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 CCM2Q9BSQ5 444 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 CLEC4MQ9H2X3 399 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-218ENST00000482171 OR51B5Q9H339 312 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 IL17CQ9P0M4 197 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 SPATA7Q9P0W8 599 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 EDDM13A0A1B0GTR0 161 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 PRORSD1PA6NEY8 169 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 EFCAB9A8MZ26 197 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 ZNF30P17039 623 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 PRKACGP22612 351 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 DNAJB13P59910 316 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 C1QTNF8P60827 252 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 PMS2P3Q13401 168 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 LAPTM5Q13571 262 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 ANXA8L1Q5VT79 327 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 ANKRD26P1Q6NSI1 321 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 TAF8Q7Z7C8 310 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 RAB43Q86YS6 212 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 SCML4Q8N228 414 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 AURKBQ96GD4 344 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-218ENST00000482171 SPACA7Q96KW9 195 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 EHD1Q9H4M9 534 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 TOR4AQ9NXH8 423 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 ACTR3BQ9P1U1 418 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 VPS29Q9UBQ0 182 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 TAC3Q9UHF0 121 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 DNAJC15Q9Y5T4 150 aa10.99□□□□□ -0.65
SMPD4-218ENST00000482171 I6L893 689 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-218ENST00000482171 PI15O43692 258 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 TSPAN19P0C672 248 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 PRPS2P11908 318 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 TLX1P31314 330 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-218ENST00000482171 ZNF805Q5CZA5 627 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 CRTC1Q6UUV9 634 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 C16orf62Q7Z3J2 963 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 THOC6Q86W42 341 aaKnown RBP10.98□□□□□ -0.65
SMPD4-218ENST00000482171 LMLNQ96KR4 655 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 MUC13Q9H3R2 512 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-218ENST00000482171 CCRL2O00421 344 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 PCDH7O60245 1069 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 RAP2AP10114 183 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 PCSK6P29122 969 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 HTR6P50406 440 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 VBP1P61758 197 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 KCTD11Q693B1 232 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 NEK5Q6P3R8 708 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 ZNF773Q6PK81 442 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 PLET1Q6UQ28 207 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 PRR23BQ6ZRT6 265 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 GAREM2Q75VX8 874 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 KDM1BQ8NB78 822 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 PEX13Q92968 403 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 RERGQ96A58 199 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-218ENST00000482171 TOX2Q96NM4 488 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 PRRG3Q9BZD7 231 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 SMURF2Q9HAU4 748 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 ABCB9Q9NP78 766 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 IGSF5Q9NSI5 407 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 CCL26Q9Y258 94 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 ANGPT4Q9Y264 503 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 RUVBL1Q9Y265 456 aaKnown RBP10.98□□□□□ -0.65
SMPD4-218ENST00000482171 CEPT1Q9Y6K0 416 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 MYO10Q9HD67 2058 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 A0A1W2PP55 124 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 NOTOA8MTQ0 251 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 WASH4PA8MWX3 477 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 MAGEB17A8MXT2 336 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 VILLO15195 856 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 UGT2B11O75310 529 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 BMP10O95393 424 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 ACRV1P26436 265 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 VARSP26640 1264 aaKnown RBP10.98□□□□□ -0.65
SMPD4-218ENST00000482171 ASMTP46597 345 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 AP1S2P56377 157 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 ILF3Q12906 894 aaKnown RBP eCLIP10.98□□□□□ -0.652e-9■□□□□ 10.1
SMPD4-218ENST00000482171 IL18R1Q13478 541 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 NPTX1Q15818 432 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 ZNF438Q7Z4V0 828 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 ARMC8Q8IUR7 673 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 OR5AK3PQ8NH89 298 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 BCL7CQ8WUZ0 217 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-218ENST00000482171 NSMCE3Q96MG7 304 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 ZNF641Q96N77 438 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-218ENST00000482171 SORT1Q99523 831 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 CGREF1Q99674 301 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 CD244Q9BZW8 370 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 TREX1Q9NSU2 369 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 WASH3PC4AMC7 463 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 MANBAO00462 879 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 NDUFB5O43674 189 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 IL6P05231 212 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 HOXB2P14652 356 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 EN2P19622 333 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-218ENST00000482171 NKX2-5P52952 324 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-218ENST00000482171 ZSWIM7Q19AV6 140 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 TNFAIP8L2Q6P589 184 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-218ENST00000482171 TMEM145Q8NBT3 493 aa10.98□□□□□ -0.65
SMPD4-218ENST00000482171 GLYATL1Q969I3 302 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms