RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-223ENST00000481173 MTMR12Q9C0I1 747 aa2.53□□□□□ -2
CCNL1-223ENST00000481173 TUBB1Q9H4B7 451 aa2.53□□□□□ -2
CCNL1-223ENST00000481173 PDE7BQ9NP56 450 aa2.53□□□□□ -2
CCNL1-223ENST00000481173 HAO2Q9NYQ3 351 aa2.53□□□□□ -2
CCNL1-223ENST00000481173 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.53□□□□□ -2
CCNL1-223ENST00000481173 ZNF69Q9UC07 566 aa2.53□□□□□ -2
CCNL1-223ENST00000481173 VPS28Q9UK41 221 aa2.53□□□□□ -2
CCNL1-223ENST00000481173 IGKV6D-21A0A0A0MT36 114 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 A0A1W2PPM1 405 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 A0A1W2PPQ1 181 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 PHF1O43189 567 aaPredicted RBP2.52□□□□□ -2.01
CCNL1-223ENST00000481173 GPRIN2O60269 458 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 GALR3O60755 368 aaPredicted RBP2.52□□□□□ -2.01
CCNL1-223ENST00000481173 GP1BBP13224 206 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 EIF2DP41214 584 aaKnown RBP2.52□□□□□ -2.01
CCNL1-223ENST00000481173 OR3A2P47893 321 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 ZFP36L2P47974 494 aaKnown RBP2.52□□□□□ -2.01
CCNL1-223ENST00000481173 EPS8Q12929 822 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 TRAP1Q12931 704 aaKnown RBP2.52□□□□□ -2.01
CCNL1-223ENST00000481173 PRKG2Q13237 762 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 TRIM29Q14134 588 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 OR4A47Q6IF82 309 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 FAM198BQ6UWH4 519 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 MARCH9Q86YJ5 346 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 OR4N5Q8IXE1 308 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 RPAP2Q8IXW5 612 aaPredicted RBP2.52□□□□□ -2.01
CCNL1-223ENST00000481173 NDUFAF2Q8N183 169 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 TYMSOSQ8TAI1 123 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 PRPF31Q8WWY3 499 aaKnown RBP2.52□□□□□ -2.01
CCNL1-223ENST00000481173 EVI5LQ96CN4 794 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 ZNF830Q96NB3 372 aaPredicted RBP2.52□□□□□ -2.01
CCNL1-223ENST00000481173 SLC2A11Q9BYW1 496 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 PRRG4Q9BZD6 226 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 Q9H8V8 135 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 CLIP2Q9UDT6 1046 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 SLC24A2Q9UI40 661 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 RPS6KL1Q9Y6S9 549 aa2.52□□□□□ -2.01
CCNL1-223ENST00000481173 IGHV4-30-2A0A087WSY4 118 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.51□□□□□ -2.01
CCNL1-223ENST00000481173 GLTPD2A6NH11 291 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 TRIM77I1YAP6 450 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 CCL24O00175 119 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 RAB40ALP0C0E4 278 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 LINGO3P0C6S8 592 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 PORP16435 677 aaPredicted RBP2.51□□□□□ -2.01
CCNL1-223ENST00000481173 AOC1P19801 751 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 PAX3P23760 479 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 AZGP1P25311 298 aaKnown RBP2.51□□□□□ -2.01
CCNL1-223ENST00000481173 SGCGQ13326 291 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 ZNF177Q13360 481 aaPredicted RBP2.51□□□□□ -2.01
CCNL1-223ENST00000481173 TRA2AQ13595 282 aaKnown RBP eCLIP2.51□□□□□ -2.01
CCNL1-223ENST00000481173 BAATQ14032 418 aaPredicted RBP2.51□□□□□ -2.01
CCNL1-223ENST00000481173 MS4A18Q3C1V0 323 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 ITPRIPL1Q6GPH6 555 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 PRR27Q6MZM9 219 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 FCRLAQ7L513 359 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 KCNMB4Q86W47 210 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 METTL21AQ8WXB1 218 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 PIK3R3Q92569 461 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 NSUN4Q96CB9 384 aaKnown RBP2.51□□□□□ -2.01
CCNL1-223ENST00000481173 ABHD1Q96SE0 405 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 TREX2Q9BQ50 279 aaPredicted RBP2.51□□□□□ -2.01
CCNL1-223ENST00000481173 ADNPQ9H2P0 1102 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 PARLQ9H300 379 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 MTHFD2LQ9H903 347 aaPredicted RBP2.51□□□□□ -2.01
CCNL1-223ENST00000481173 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.51□□□□□ -2.01
CCNL1-223ENST00000481173 OLAHQ9NV23 265 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 MRPL15Q9P015 296 aaKnown RBP2.51□□□□□ -2.01
CCNL1-223ENST00000481173 LNPEPQ9UIQ6 1025 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 CPSF3Q9UKF6 684 aaKnown RBP2.51□□□□□ -2.01
CCNL1-223ENST00000481173 PRDM4Q9UKN5 801 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 SELENOKQ9Y6D0 94 aa2.51□□□□□ -2.01
CCNL1-223ENST00000481173 IGSF1Q8N6C5 1336 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 CASTOR2A6NHX0 329 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 ERAL1O75616 437 aaKnown RBP2.5□□□□□ -2.01
CCNL1-223ENST00000481173 BEST1O76090 585 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 ACSL3O95573 720 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 ALOX12P18054 663 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 PIK3R1P27986 724 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 CUL3Q13618 768 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 DNAAF5Q86Y56 855 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 FAM89BQ8N5H3 189 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 SUMF1Q8NBK3 374 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 KLHL30-AS1Q8NEE0 82 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 OR52B6Q8NGF0 335 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 TEKT4Q8WW24 435 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 GCNAQ96QF7 691 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 NAP1L4Q99733 375 aaKnown RBP2.5□□□□□ -2.01
CCNL1-223ENST00000481173 MXD3Q9BW11 206 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 KLHL4Q9C0H6 718 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 EGLN3Q9H6Z9 239 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 ZNF107Q9UII5 783 aaPredicted RBP2.5□□□□□ -2.01
CCNL1-223ENST00000481173 CELA1Q9UNI1 258 aa2.5□□□□□ -2.01
CCNL1-223ENST00000481173 PPIEQ9UNP9 301 aaKnown RBP2.5□□□□□ -2.01
CCNL1-223ENST00000481173 IGLV4-3A0A075B6K6 122 aa2.49□□□□□ -2.01
CCNL1-223ENST00000481173 A0A1W2PPK0 400 aa2.49□□□□□ -2.01
CCNL1-223ENST00000481173 ZNF840PA6NDX5 716 aa2.49□□□□□ -2.01
CCNL1-223ENST00000481173 K7EQD1 137 aa2.49□□□□□ -2.01
CCNL1-223ENST00000481173 O00370 1275 aa2.49□□□□□ -2.01
CCNL1-223ENST00000481173 TLX2O43763 284 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms