RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 KCNAB1Q14722 419 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 KIR2DS3Q14952 304 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 ACAP2Q15057 778 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 TGFBIQ15582 683 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 ZXDCQ2QGD7 858 aaPredicted RBP8.71□□□□□ -1.02
VCP-206ENST00000480327 DEFB109BQ30KR1 87 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 C16orf46Q6P387 395 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 KLC3Q6P597 504 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 SPESP1Q6UW49 350 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 ADAMTSL2Q86TH1 951 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 NLGN4XQ8N0W4 816 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 IQCKQ8N0W5 287 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 C4orf33Q8N1A6 199 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 NLGN4YQ8NFZ3 816 aaPredicted RBP8.71□□□□□ -1.02
VCP-206ENST00000480327 FLVCR1-AS1Q8TAF5 88 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 C9orf43Q8TAL5 461 aaPredicted RBP8.71□□□□□ -1.02
VCP-206ENST00000480327 STAG3L4Q8TBR4 150 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 SMPDL3AQ92484 453 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 ANKRD7Q92527 254 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 ESAMQ96AP7 390 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 ROPN1BQ9BZX4 212 aaPredicted RBP8.71□□□□□ -1.02
VCP-206ENST00000480327 RAB33BQ9H082 229 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 GPN2Q9H9Y4 310 aaPredicted RBP8.71□□□□□ -1.02
VCP-206ENST00000480327 ROPN1Q9HAT0 212 aaPredicted RBP8.71□□□□□ -1.02
VCP-206ENST00000480327 ARGLU1Q9NWB6 273 aaPredicted RBP8.71□□□□□ -1.02
VCP-206ENST00000480327 SOHLH2Q9NX45 425 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 CPSF2Q9P2I0 782 aaKnown RBP8.71□□□□□ -1.02
VCP-206ENST00000480327 EPHA6Q9UF33 1036 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 TAC3Q9UHF0 121 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 ANAPC2Q9UJX6 822 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 MAN2B2Q9Y2E5 1009 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 CCDC88CQ9P219 2028 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 CENPEQ02224 2701 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 SPTBP11277 2137 aa8.71□□□□□ -1.02
VCP-206ENST00000480327 CELSR2Q9HCU4 2923 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 UQCRHLA0A096LP55 91 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 A0A0J9YY10 115 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 TLCD2A6NGC4 264 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 ZNF839A8K0R7 811 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 MATN2O00339 956 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 RGS16O15492 202 aaPredicted RBP8.7□□□□□ -1.02
VCP-206ENST00000480327 TAPBPO15533 448 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 PRICKLE3O43900 615 aaPredicted RBP8.7□□□□□ -1.02
VCP-206ENST00000480327 PDGFAP04085 211 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 UQCRHP07919 91 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 ANXA5P08758 320 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 ERGP11308 486 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 GP1BBP13224 206 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 H2AFXP16104 143 aaPredicted RBP8.7□□□□□ -1.02
VCP-206ENST00000480327 KRT4P19013 534 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 HSD17B2P37059 387 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 GDF5P43026 501 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 AP1S2P56377 157 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 SH3BP2P78314 561 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 ABHD18Q0P651 414 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 CASP8Q14790 479 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 ARHGAP19Q14CB8 494 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 RASA2Q15283 850 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 SLC5A12Q1EHB4 618 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 TSNAXIP1Q2TAA8 658 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 TECRLQ5HYJ1 363 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 CEACAM20Q6UY09 585 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 CCDC91Q7Z6B0 441 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 SRRM1Q8IYB3 904 aaKnown RBP8.7□□□□□ -1.02
VCP-206ENST00000480327 LRRC56Q8IYG6 542 aaPredicted RBP8.7□□□□□ -1.02
VCP-206ENST00000480327 RIBC1Q8N443 379 aaPredicted RBP8.7□□□□□ -1.02
VCP-206ENST00000480327 ATL1Q8WXF7 558 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 STARD8Q92502 1023 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 MIB2Q96AX9 1013 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 SLC22A18Q96BI1 424 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 FBXL8Q96CD0 374 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 CABS1Q96KC9 395 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 CATSPER2Q96P56 530 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 PSMG3-AS1Q96PY0 264 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 TEFMQ96QE5 360 aaKnown RBP8.7□□□□□ -1.02
VCP-206ENST00000480327 ATOH8Q96SQ7 321 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 TMEM109Q9BVC6 243 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 C12orf65Q9H3J6 166 aaKnown RBP8.7□□□□□ -1.02
VCP-206ENST00000480327 CCDC177Q9NQR7 707 aaPredicted RBP8.7□□□□□ -1.02
VCP-206ENST00000480327 WWOXQ9NZC7 414 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 TMEM216Q9P0N5 145 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 XPR1Q9UBH6 696 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 LGALS13Q9UHV8 139 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 TP53TG5Q9Y2B4 290 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 KCNMB2Q9Y691 235 aa8.7□□□□□ -1.02
VCP-206ENST00000480327 FER1L5A0AVI2 2057 aa8.69□□□□□ -1.02
VCP-206ENST00000480327 HIVEP3Q5T1R4 2406 aa8.69□□□□□ -1.02
VCP-206ENST00000480327 COPEO14579 308 aa8.69□□□□□ -1.02
VCP-206ENST00000480327 NRP2O60462 931 aa8.69□□□□□ -1.02
VCP-206ENST00000480327 CCNT2O60583 730 aaKnown RBP8.69□□□□□ -1.02
VCP-206ENST00000480327 KERAO60938 352 aa8.69□□□□□ -1.02
VCP-206ENST00000480327 SPAG7O75391 227 aa8.69□□□□□ -1.02
VCP-206ENST00000480327 WDR47O94967 919 aa8.69□□□□□ -1.02
VCP-206ENST00000480327 ZBTB11O95625 1053 aaPredicted RBP8.69□□□□□ -1.02
VCP-206ENST00000480327 RBP1P09455 135 aa8.69□□□□□ -1.02
VCP-206ENST00000480327 ANKRD34CP0C6C1 535 aa8.69□□□□□ -1.02
VCP-206ENST00000480327 EBLN1P0CF75 366 aa8.69□□□□□ -1.02
VCP-206ENST00000480327 COL6A2P12110 1019 aa8.69□□□□□ -1.02
VCP-206ENST00000480327 GFAPP14136 432 aa8.69□□□□□ -1.02
VCP-206ENST00000480327 CREB1P16220 341 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms