RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 CTSVO60911 334 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 SKAP2O75563 359 aaPredicted RBP8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 OTCP00480 354 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 C9P02748 559 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 STATHP02808 62 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 CAPN1P07384 714 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 CTSBP07858 339 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 VIMP08670 466 aaKnown RBP8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 EBLN1P0CF75 366 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 C1GALT1C1LP0DN25 315 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 KITP10721 976 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 JUPP14923 745 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 CKMT2P17540 419 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 GNAZP19086 355 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 DRD4P21917 467 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 ACP1P24666 158 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 SERPINB3P29508 390 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 PDX1P52945 283 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 PKNOX1P55347 436 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 CLDN6P56747 220 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 SNRPNP63162 240 aaKnown RBP8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 GPLD1P80108 840 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 IRF8Q02556 426 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 SF3A3Q12874 501 aaKnown RBP eCLIP8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 PRKAA1Q13131 559 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 SLBPQ14493 270 aaKnown RBP eCLIP8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 SUZ12Q15022 739 aaKnown RBP8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 SF1Q15637 639 aaKnown RBP8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 PDCD2Q16342 344 aaPredicted RBP8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 INAVAQ3KP66 663 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 UGT3A2Q3SY77 523 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 XKR6Q5GH73 641 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 ATG9BQ674R7 924 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 GRHL2Q6ISB3 625 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 SCIMPQ6UWF3 145 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 NXPE4Q6UWF7 544 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 ZNF574Q6ZN55 896 aaPredicted RBP8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 USP53Q70EK8 1073 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 MILR1Q7Z6M3 343 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 MTERF4Q7Z6M4 381 aaKnown RBP8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 PAQR7Q86WK9 346 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 ANKRD53Q8N9V6 530 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 OR4K1Q8NGD4 311 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 OR6C4Q8NGE1 309 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 RFWD2Q8NHY2 731 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 NCSTNQ92542 709 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 NAT6Q93015 286 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 PRAP1Q96NZ9 151 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 TGM7Q96PF1 710 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 FCRL4Q96PJ5 515 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 HAUS8Q9BT25 410 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 DPH7Q9BTV6 452 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 RAB33BQ9H082 229 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 PCBD2Q9H0N5 130 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 ACTR8Q9H981 624 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 PELI2Q9HAT8 420 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 FAM60AQ9NP50 221 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 MRPS30Q9NP92 439 aaKnown RBP8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 GIMAP2Q9UG22 337 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 KLHL3Q9UH77 587 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 ZNF490Q9ULM2 529 aaPredicted RBP8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 ENTPD2Q9Y5L3 495 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 KCNE2Q9Y6J6 123 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 SCN3AQ9NY46 2000 aa8.61□□□□□ -1.03
NUDCD3-208ENST00000480209 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 TLCD2A6NGC4 264 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 MATN2O00339 956 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 NTN3O00634 580 aaPredicted RBP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 AZIN1O14977 448 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 TNFSF14O43557 240 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 LCMT2O60294 686 aaKnown RBP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 CCNDBP1O95273 360 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 CLDN9O95484 217 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 TBX6O95947 436 aaPredicted RBP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 HGFP14210 728 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 ALOX15P16050 662 aaPredicted RBP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 CMPK1P30085 196 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 ARL1P40616 181 aaPredicted RBP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 BCL6P41182 706 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 CASP2P42575 452 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 RPL14P50914 215 aaKnown RBP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 NAA20P61599 178 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 ABATP80404 500 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 BTKQ06187 659 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 CYP4F3Q08477 520 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 COL9A2Q14055 689 aaPredicted RBP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 ZRSR2Q15696 482 aaKnown RBP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 TBCCQ15814 346 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 CPSF6Q16630 551 aaKnown RBP eCLIP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 DEFB110Q30KQ9 67 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 VWA5B1Q5TIE3 1220 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 ARMC6Q6NXE6 501 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 RNF44Q7L0R7 432 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 DGLUCYQ7Z3D6 616 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 ADCK2Q7Z695 626 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 B3GNT8Q7Z7M8 397 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 MYLK4Q86YV6 388 aaPredicted RBP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 WDR75Q8IWA0 830 aaKnown RBP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 OR2T11Q8NH01 316 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms