RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 STX16O14662 325 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 NRP2O60462 931 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 SMIM24O75264 130 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 DLGAP3O95886 979 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 SBK3P0C264 359 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 CDH1P12830 882 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 CCR8P51685 355 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 CDC16Q13042 620 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 MAP7Q14244 749 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 PCBP2Q15366 365 aaKnown RBP eCLIP18.91■□□□□ 0.622e-8■□□□□ 8.6
LIME1-205ENST00000480139 PDK4Q16654 411 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 PFKFB4Q16877 469 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 DEFB110Q30KQ9 67 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 TCTE1Q5JU00 501 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 FBXO42Q6P3S6 717 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 TLDC1Q6P9B6 456 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 ADCK2Q7Z695 626 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 GPR135Q8IZ08 494 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 SELENOSQ9BQE4 189 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 ULBP3Q9BZM4 244 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 EHD1Q9H4M9 534 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 ARGLU1Q9NWB6 273 aaPredicted RBP18.91■□□□□ 0.62
LIME1-205ENST00000480139 SENP1Q9P0U3 644 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 AP1M2Q9Y6Q5 423 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 FRYQ5TBA9 3013 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 MDC1Q14676 2089 aaKnown RBP18.9■□□□□ 0.62
LIME1-205ENST00000480139 KCNE1BA0A087WTH5 132 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 E7EQ34 232 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 K7EPI3 171 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 HAT1O14929 419 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 TLX3O43711 291 aaPredicted RBP18.9■□□□□ 0.62
LIME1-205ENST00000480139 SCRG1O75711 98 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 OR2B3O76000 313 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 STK17BO94768 372 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 TIAF1O95411 115 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 LIPCP11150 499 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 GRK3P35626 688 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 AGTR2P50052 363 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 RPS15AP62244 130 aaKnown RBP18.9■□□□□ 0.62
LIME1-205ENST00000480139 NFKB2Q00653 900 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 PCDH1Q08174 1060 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 NXPE4Q6UWF7 544 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 PROSER1Q86XN7 944 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 DTX1Q86Y01 620 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 TMEM126BQ8IUX1 230 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 ZNF248Q8NDW4 579 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 ZCCHC14Q8WYQ9 949 aaKnown RBP18.9■□□□□ 0.62
LIME1-205ENST00000480139 THAP11Q96EK4 314 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 OR2A5Q96R48 311 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 OPTCQ9UBM4 332 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 GRID1Q9ULK0 1009 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 ASB1Q9Y576 335 aa18.9■□□□□ 0.62
LIME1-205ENST00000480139 FREM2Q5SZK8 3169 aa18.89■□□□□ 0.62
LIME1-205ENST00000480139 A0A0J9YVX5 310 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 FITM1A5D6W6 292 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 COPEO14579 308 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 ZSCAN9O15535 394 aaPredicted RBP18.89■□□□□ 0.61
LIME1-205ENST00000480139 CCNT2O60583 730 aaKnown RBP18.89■□□□□ 0.61
LIME1-205ENST00000480139 CPNE3O75131 537 aaKnown RBP18.89■□□□□ 0.61
LIME1-205ENST00000480139 HBQ1P09105 142 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 H2AFXP16104 143 aaPredicted RBP18.89■□□□□ 0.61
LIME1-205ENST00000480139 ZNF28P17035 718 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 TAC1P20366 129 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 GCGRP47871 477 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 PIK3CGP48736 1102 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 CCDC153Q494R4 210 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 FBXO48Q5FWF7 155 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 CATSPEREQ5SY80 951 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 CEP85LQ5SZL2 805 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 YOD1Q5VVQ6 348 aaPredicted RBP18.89■□□□□ 0.61
LIME1-205ENST00000480139 ATG9BQ674R7 924 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 FRMPD2BQ6IN97 320 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 SLCO4C1Q6ZQN7 724 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 SRRM1Q8IYB3 904 aaKnown RBP18.89■□□□□ 0.61
LIME1-205ENST00000480139 PTGR2Q8N8N7 351 aaPredicted RBP18.89■□□□□ 0.61
LIME1-205ENST00000480139 ESAMQ96AP7 390 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 WDR34Q96EX3 536 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 APOPT1Q96IL0 206 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 LRFN5Q96NI6 719 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 EMCNQ9ULC0 261 aa18.89■□□□□ 0.61
LIME1-205ENST00000480139 APC2O95996 2303 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 ACACBO00763 2458 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 TRBC2A0A5B9 178 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 CLGNO14967 610 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 RGS16O15492 202 aaPredicted RBP18.88■□□□□ 0.61
LIME1-205ENST00000480139 KIAA0754O94854 1291 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 EPORP19235 508 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 EMP3P54852 163 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 REEP5Q00765 189 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 E2F2Q14209 437 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 TNFAIP8L3Q5GJ75 292 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 C16orf46Q6P387 395 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 TMPRSS11BQ86T26 416 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 ZFAND4Q86XD8 727 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 C4orf33Q8N1A6 199 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 TBC1D19Q8N5T2 526 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 BANPQ8N9N5 519 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 SNX31Q8N9S9 440 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 RERGQ96A58 199 aaPredicted RBP18.88■□□□□ 0.61
LIME1-205ENST00000480139 PGM2Q96G03 612 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms