RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	CPA2	P48052	419 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	CSNK1G2	P78368	415 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	EMX2	Q04743	252 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	SQLE	Q14534	574 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	RPS6KA2	Q15349	733 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	SHB	Q15464	509 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	IL23R	Q5VWK5	629 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	OGFOD3	Q6PK18	319 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	TMIGD1	Q6UXZ0	262 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	PRR23B	Q6ZRT6	265 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	ADCK2	Q7Z695	626 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	KRT78	Q8N1N4	520 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	SDR16C5	Q8N3Y7	309 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	OR2L3	Q8NG85	312 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	AIF1L	Q9BQI0	150 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	TBC1D10A	Q9BXI6	508 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	LRTM1	Q9HBL6	345 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	TAGLN3	Q9UI15	199 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	KLHL20	Q9Y2M5	609 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	KNL1	Q8NG31	2342 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	PSMD12	O00232	456 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-223	ENST00000479656	LCMT2	O60294	686 aa	Known RBP	10.78	□□□□□ -0.68
APTX-223	ENST00000479656	ATP5H	O75947	161 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	ETHE1	O95571	254 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	TGFB1	P01137	390 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	GPX3	P22352	226 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	CALB2	P22676	271 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	CXCR2	P25025	360 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	CMPK1	P30085	196 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	ADSL	P30566	484 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-223	ENST00000479656	RPS13	P62277	151 aa	Known RBP	10.78	□□□□□ -0.68
APTX-223	ENST00000479656	RPL38	P63173	70 aa	Known RBP	10.78	□□□□□ -0.68
APTX-223	ENST00000479656	ABAT	P80404	500 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	ZNF33B	Q06732	778 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	KIAA0040	Q15053	153 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	LPAL2	Q16609	132 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-223	ENST00000479656	KIAA1614	Q5VZ46	1190 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	PAOX	Q6QHF9	649 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	PLD3	Q8IV08	490 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	UBE2E3	Q969T4	207 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	SLC22A18	Q96BI1	424 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	REPS1	Q96D71	796 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	APIP	Q96GX9	242 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	DPH7	Q9BTV6	452 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	SLC6A20	Q9NP91	592 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	TXLNG	Q9NUQ3	528 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	AIG1	Q9NVV5	245 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	HRASLS2	Q9NWW9	162 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	C1orf109	Q9NX04	203 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	CCDC167	Q9P0B6	97 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	VPS29	Q9UBQ0	182 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	GPR45	Q9Y5Y3	372 aa		10.78	□□□□□ -0.68
APTX-223	ENST00000479656	GSAP	A4D1B5	854 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	PATE3	B3GLJ2	98 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	OR1F1	O43749	312 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	NRP2	O60462	931 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	RSL1D1	O76021	490 aa	Known RBP	10.77	□□□□□ -0.69
APTX-223	ENST00000479656	CFI	P05156	583 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	COX4I1	P13073	169 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	IDO1	P14902	403 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	RXRG	P48443	463 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	ARRB1	P49407	418 aa	Predicted RBP	10.77	□□□□□ -0.69
APTX-223	ENST00000479656	ATP4B	P51164	291 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	STX1B	P61266	288 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	NCALD	P61601	193 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	CSTF3	Q12996	717 aa	Known RBP	10.77	□□□□□ -0.69
APTX-223	ENST00000479656	KIR2DS3	Q14952	304 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	GSTA3	Q16772	222 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	DUOXA1	Q1HG43	343 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	AGK	Q53H12	422 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	C17orf82	Q86X59	251 aa	Predicted RBP	10.77	□□□□□ -0.69
APTX-223	ENST00000479656	ZFAND4	Q86XD8	727 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	RBM12B	Q8IXT5	1001 aa	Known RBP	10.77	□□□□□ -0.69
APTX-223	ENST00000479656	ANKRD53	Q8N9V6	530 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	OR9I1	Q8NGQ6	314 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	FLVCR1-AS1	Q8TAF5	88 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	10.77	□□□□□ -0.69
APTX-223	ENST00000479656	CMTM5	Q96DZ9	223 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	CMTM7	Q96FZ5	175 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	SLC45A3	Q96JT2	553 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	OR2A14	Q96R47	310 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	TWSG1	Q9GZX9	223 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	BRF2	Q9HAW0	419 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	TMEM184C	Q9NVA4	438 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	ACTR10	Q9NZ32	417 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	POLR3H	Q9Y535	204 aa	Predicted RBP	10.77	□□□□□ -0.69
APTX-223	ENST00000479656	CSNK1G3	Q9Y6M4	447 aa		10.77	□□□□□ -0.69
APTX-223	ENST00000479656	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.77	□□□□□ -0.69
APTX-223	ENST00000479656	FAM221B	A6H8Z2	402 aa		10.76	□□□□□ -0.69
APTX-223	ENST00000479656	ANKDD1B	A6NHY2	528 aa		10.76	□□□□□ -0.69
APTX-223	ENST00000479656	FOXE1	O00358	373 aa	Predicted RBP	10.76	□□□□□ -0.69
APTX-223	ENST00000479656	SLC22A2	O15244	555 aa		10.76	□□□□□ -0.69
APTX-223	ENST00000479656	CCNDBP1	O95273	360 aa		10.76	□□□□□ -0.69
APTX-223	ENST00000479656	GIMD1	P0DJR0	217 aa		10.76	□□□□□ -0.69
APTX-223	ENST00000479656	THRA	P10827	490 aa		10.76	□□□□□ -0.69
APTX-223	ENST00000479656	G6PD	P11413	515 aa		10.76	□□□□□ -0.69
APTX-223	ENST00000479656	HSD3B1	P14060	373 aa		10.76	□□□□□ -0.69
APTX-223	ENST00000479656	EZR	P15311	586 aa	Known RBP	10.76	□□□□□ -0.69
APTX-223	ENST00000479656	UGT2B7	P16662	529 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms