RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 HRH3Q9Y5N1 445 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 A0A0A6YYC8 382 aaPredicted RBP16.37■□□□□ 0.21
HMGN1-212ENST00000479586 A0A0U1RQJ8 604 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 A0A1W2PPV9 198 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 CCDC162PA2VCL2 907 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 IQCF5A8MTL0 148 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 I3L1I5 382 aaPredicted RBP16.37■□□□□ 0.21
HMGN1-212ENST00000479586 NEURL1O76050 574 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 ZWINTO95229 277 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 SP1P08047 785 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 ZNF24P17028 368 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 BDKRB1P46663 353 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 MEP1AQ16819 746 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 CPEB2Q7Z5Q1 589 aaKnown RBP16.37■□□□□ 0.21
HMGN1-212ENST00000479586 CD163Q86VB7 1156 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 RHOT2Q8IXI1 618 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 SHISA5Q8N114 240 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 LILRB4Q8NHJ6 448 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 ASB5Q8WWX0 329 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 METTL21AQ8WXB1 218 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 HDAC10Q969S8 669 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 DPH7Q9BTV6 452 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 PIH1D1Q9NWS0 290 aaKnown RBP16.37■□□□□ 0.21
HMGN1-212ENST00000479586 GNPTGQ9UJJ9 305 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 RNF6Q9Y252 685 aa16.37■□□□□ 0.21
HMGN1-212ENST00000479586 GABRR3A8MPY1 467 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 APOC4-APOC2K7ER74 178 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 PSTPIP1O43586 416 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 APOC2P02655 101 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 TPOP07202 933 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 HOXD4P09016 255 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-212ENST00000479586 CHRNB4P30926 498 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 MARCKSL1P49006 195 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 SNRPNP63162 240 aaKnown RBP16.36■□□□□ 0.21
HMGN1-212ENST00000479586 OC90Q02509 493 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-212ENST00000479586 LTBQ06643 244 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 SLC25A25Q6KCM7 469 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 LRRC8BQ6P9F7 803 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 BBS12Q6ZW61 710 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 ARHGEF39Q8N4T4 335 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 CPSF7Q8N684 471 aaKnown RBP16.36■□□□□ 0.21
HMGN1-212ENST00000479586 FAM57AQ8TBR7 257 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 ASZ1Q8WWH4 475 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 SPATA13Q96N96 652 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 FAM118BQ9BPY3 351 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 ACAT2Q9BWD1 397 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 GOLPH3Q9H4A6 298 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 KCNJ16Q9NPI9 418 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 DNAJB12Q9NXW2 375 aaKnown RBP16.36■□□□□ 0.21
HMGN1-212ENST00000479586 RUVBL2Q9Y230 463 aaKnown RBP16.36■□□□□ 0.21
HMGN1-212ENST00000479586 NFS1Q9Y697 457 aa16.36■□□□□ 0.21
HMGN1-212ENST00000479586 OR2W5A6NFC9 320 aa16.35■□□□□ 0.21
HMGN1-212ENST00000479586 FOSL1P15407 271 aa16.35■□□□□ 0.21
HMGN1-212ENST00000479586 PSMA3P25788 255 aa16.35■□□□□ 0.21
HMGN1-212ENST00000479586 PTGS2P35354 604 aa16.35■□□□□ 0.21
HMGN1-212ENST00000479586 MAPKAPK3Q16644 382 aa16.35■□□□□ 0.21
HMGN1-212ENST00000479586 KCTD11Q693B1 232 aa16.35■□□□□ 0.21
HMGN1-212ENST00000479586 Q71RC1 249 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-212ENST00000479586 CCDC71Q8IV32 467 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-212ENST00000479586 KLHDC8BQ8IXV7 354 aa16.35■□□□□ 0.21
HMGN1-212ENST00000479586 KRT222Q8N1A0 295 aa16.35■□□□□ 0.21
HMGN1-212ENST00000479586 RPRMLQ8N4K4 120 aa16.35■□□□□ 0.21
HMGN1-212ENST00000479586 RAD51AP1Q96B01 352 aa16.35■□□□□ 0.21
HMGN1-212ENST00000479586 CYTH2Q99418 400 aa16.35■□□□□ 0.21
HMGN1-212ENST00000479586 DRC3Q9H069 523 aa16.35■□□□□ 0.21
HMGN1-212ENST00000479586 ST6GALNAC2Q9UJ37 374 aa16.35■□□□□ 0.21
HMGN1-212ENST00000479586 A0A1B0GTH9 108 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 MACROD2A1Z1Q3 448 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 MROH6A6NGR9 719 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 SUN1O94901 812 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 C1orf105O95561 183 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 APOA4P06727 396 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 AOAHP28039 575 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 MINDY4Q4G0A6 757 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 CCDC38Q502W7 563 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 MFSD4BQ5TF39 518 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 ZNF468Q5VIY5 522 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-212ENST00000479586 GARNL3Q5VVW2 1013 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 TTC23LQ6PF05 361 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 CDKL3Q8IVW4 592 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-212ENST00000479586 KATNAL2Q8IYT4 538 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 HMGCLL1Q8TB92 370 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 ACTL9Q8TC94 416 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 IQCDQ96DY2 449 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 ALS2CR12Q96Q35 445 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 OLFM1Q99784 485 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 SMR3AQ99954 134 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 FERMT1Q9BQL6 677 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 SPTLC3Q9NUV7 552 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 ZNF358Q9NW07 568 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 LRFN1Q9P244 771 aa16.34■□□□□ 0.21
HMGN1-212ENST00000479586 TTC7AQ9ULT0 858 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-212ENST00000479586 FN1P02751 2386 aaKnown RBP16.34■□□□□ 0.21
HMGN1-212ENST00000479586 HEATR5BQ9P2D3 2071 aa16.33■□□□□ 0.21
HMGN1-212ENST00000479586 IGKV1-8A0A0C4DH67 115 aa16.33■□□□□ 0.2
HMGN1-212ENST00000479586 P2RX6O15547 441 aa16.33■□□□□ 0.2
HMGN1-212ENST00000479586 AKR1B10O60218 316 aa16.33■□□□□ 0.2
HMGN1-212ENST00000479586 NME2P1O60361 137 aa16.33■□□□□ 0.2
HMGN1-212ENST00000479586 VPS26AO75436 327 aa16.33■□□□□ 0.2
HMGN1-212ENST00000479586 SLC25A12O75746 678 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms