RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 FAM118BQ9BPY3 351 aa15.23■□□□□ 0.03
DDX56-210ENST00000479440 DPH7Q9BTV6 452 aa15.23■□□□□ 0.03
DDX56-210ENST00000479440 KCNK13Q9HB14 408 aa15.23■□□□□ 0.03
DDX56-210ENST00000479440 UTP6Q9NYH9 597 aaKnown RBP15.23■□□□□ 0.03
DDX56-210ENST00000479440 TTC7AQ9ULT0 858 aaPredicted RBP15.23■□□□□ 0.03
DDX56-210ENST00000479440 A0A0A6YYC8 382 aaPredicted RBP15.22■□□□□ 0.03
DDX56-210ENST00000479440 A0A1W2PPV9 198 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 FAM221AA4D161 298 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 IQCF5A8MTL0 148 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 I3L1I5 382 aaPredicted RBP15.22■□□□□ 0.03
DDX56-210ENST00000479440 TXNDC9O14530 226 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 SUN1O94901 812 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 ZNF24P17028 368 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 PTPN7P35236 360 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 EXT1Q16394 746 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 NDUFA9Q16795 377 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 HKDC1Q2TB90 917 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 CCDC38Q502W7 563 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 FASTKD1Q53R41 847 aaKnown RBP15.22■□□□□ 0.03
DDX56-210ENST00000479440 MFSD4BQ5TF39 518 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 FCRLBQ6BAA4 426 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 H3F3CQ6NXT2 135 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 CAVIN1Q6NZI2 390 aaKnown RBP15.22■□□□□ 0.03
DDX56-210ENST00000479440 CPEB2Q7Z5Q1 589 aaKnown RBP15.22■□□□□ 0.03
DDX56-210ENST00000479440 DOLPP1Q86YN1 238 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 SIAH3Q8IW03 269 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 DNAAF3Q8N9W5 541 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.22■□□□□ 0.03
DDX56-210ENST00000479440 OR4L1Q8NH43 312 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 HDAC10Q969S8 669 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 PLCD4Q9BRC7 762 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 TRIM51Q9BSJ1 452 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 TMUB1Q9BVT8 246 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 HES7Q9BYE0 225 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 OSBPL8Q9BZF1 889 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 MRPS30Q9NP92 439 aaKnown RBP15.22■□□□□ 0.03
DDX56-210ENST00000479440 ANKRD10Q9NXR5 420 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 TNFRSF10DQ9UBN6 386 aa15.22■□□□□ 0.03
DDX56-210ENST00000479440 TACC2O95359 2948 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 PRMT5O14744 637 aaPredicted RBP15.21■□□□□ 0.03
DDX56-210ENST00000479440 KPNA5O15131 536 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 TJP3O95049 919 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 CCNDBP1O95273 360 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 PKMP14618 531 aaKnown RBP15.21■□□□□ 0.03
DDX56-210ENST00000479440 IGFBP2P18065 325 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 CTNNA1P35221 906 aaKnown RBP15.21■□□□□ 0.03
DDX56-210ENST00000479440 CETN2P41208 172 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 AVPR1BP47901 424 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 AGTR2P50052 363 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 PRAMEP78395 509 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 OC90Q02509 493 aaPredicted RBP15.21■□□□□ 0.03
DDX56-210ENST00000479440 CDH17Q12864 832 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 SYT16Q17RD7 645 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 MINDY4Q4G0A6 757 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 PTRHD1Q6GMV3 140 aaKnown RBP15.21■□□□□ 0.03
DDX56-210ENST00000479440 FBXO42Q6P3S6 717 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 LRRC8BQ6P9F7 803 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 GALNTL5Q7Z4T8 443 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 CRLF3Q8IUI8 442 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 MMP21Q8N119 569 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 KRT222Q8N1A0 295 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 SLC5A8Q8N695 610 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 ASB5Q8WWX0 329 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 ZNF559Q9BR84 538 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 ACAT2Q9BWD1 397 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 VN1R1Q9GZP7 353 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 GNPTGQ9UJJ9 305 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 ANAPC5Q9UJX4 755 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 RIMKLBQ9ULI2 386 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 NFS1Q9Y697 457 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 CACNA1CQ13936 2221 aa15.21■□□□□ 0.03
DDX56-210ENST00000479440 MTORP42345 2549 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 IGHV3-20A0A0C4DH32 117 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 GABRR3A8MPY1 467 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 FOXS1O43638 330 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 MFAP3LO75121 409 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 FAM155BO75949 473 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 METTL18O95568 372 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 SP1P08047 785 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 DRD2P14416 443 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 EZRP15311 586 aaKnown RBP15.2■□□□□ 0.02
DDX56-210ENST00000479440 RPA3P35244 121 aaPredicted RBP15.2■□□□□ 0.02
DDX56-210ENST00000479440 CD96P40200 585 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 EFNA3P52797 238 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 PPP2R2AP63151 447 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 HSF1Q00613 529 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 FAM53BQ14153 422 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 FASTKQ14296 549 aaKnown RBP15.2■□□□□ 0.02
DDX56-210ENST00000479440 CCSMST1Q4G0I0 132 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 TSTD2Q5T7W7 516 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 SPINK14Q6IE38 97 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 C3P1Q6ZMU1 363 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 LANCL3Q6ZV70 420 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 OTOAQ7RTW8 1153 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 PAQR7Q86WK9 346 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 TAB3Q8N5C8 712 aaPredicted RBP15.2■□□□□ 0.02
DDX56-210ENST00000479440 OR6P1Q8NGX9 317 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 M1APQ8TC57 530 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 SLC24A3Q9HC58 644 aa15.2■□□□□ 0.02
DDX56-210ENST00000479440 A0A0U1RQJ8 604 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms