RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SH3KBP1Q96B97 665 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ZNF653Q96CK0 615 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 SNRNP40Q96DI7 357 aaKnown RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 BARD1Q99728 777 aaKnown RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 MAP3K3Q99759 626 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ING2Q9H160 280 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 OSGEPL1Q9H4B0 414 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 FAM83DQ9H4H8 585 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ZWILCHQ9H900 591 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 RMI1Q9H9A7 625 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 PCDH9Q9HC56 1237 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ZBTB20Q9HC78 741 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 INTS7Q9NVH2 962 aaKnown RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ASF1BQ9NVP2 202 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 RBM22Q9NW64 420 aaKnown RBP eCLIP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 DONSONQ9NYP3 566 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 TRIM10Q9UDY6 481 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 MAPRE3Q9UPY8 281 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 SHOC2Q9UQ13 582 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 FARSAQ9Y285 508 aaKnown RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 CSAG2Q9Y5P2 127 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 A6NL46 340 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 PDZK1P1A8MUH7 402 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ANKRD66B4E2M5 251 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 GAPDHSO14556 408 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ZNF185O15231 689 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 HCRTR1O43613 425 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 CNOT3O75175 753 aaKnown RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 RNF8O76064 485 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 SLC25A14O95258 325 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 DDAH2O95865 285 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 VIPP01282 170 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 PYGLP06737 847 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 HKR1P10072 659 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 SKILP12757 684 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 FERP16591 822 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 MAN1A1P33908 653 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 RORAP35398 523 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 CD86P42081 329 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ARCN1P48444 511 aaKnown RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ZNF135P52742 658 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 CTSCP53634 463 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 EPHB1P54762 984 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 UBXN1Q04323 297 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 GBE1Q04446 702 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ITKQ08881 620 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ZBTB17Q13105 803 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 TUBB3Q13509 450 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ATP1A4Q13733 1029 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 DPYSL3Q14195 570 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 BECN1Q14457 450 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 PAFAH1B3Q15102 231 aaKnown RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 NOMO1Q15155 1222 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 RPE65Q16518 533 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ATP13A5Q4VNC0 1218 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 BOLA3Q53S33 107 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 AGAP9Q5VTM2 703 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 DUS1LQ6P1R4 473 aaKnown RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 WASH2PQ6VEQ5 465 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 RBM43Q6ZSC3 357 aaKnown RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 GDF7Q7Z4P5 450 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 SYVN1Q86TM6 617 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 PPP1R3BQ86XI6 285 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 RAVER1Q8IY67 606 aaKnown RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 DSELQ8IZU8 1212 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ENDOVQ8N8Q3 282 aaKnown RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 GLIS1Q8NBF1 620 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 SIDT2Q8NBJ9 832 aaKnown RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 TEKT4Q8WW24 435 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 THAP4Q8WY91 577 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 FATE1Q969F0 183 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 GLYATL1Q969I3 302 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 PNPLA2Q96AD5 504 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 TADA1Q96BN2 335 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ZNF501Q96CX3 271 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ZNF514Q96K75 400 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 TSGA13Q96PP4 275 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 SMAD5Q99717 465 aaKnown RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 TIMM29Q9BSF4 260 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 NUP85Q9BW27 656 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 SPATA16Q9BXB7 569 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 POLR1EQ9GZS1 481 aaKnown RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 RAB33BQ9H082 229 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ISCUQ9H1K1 167 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 POFUT1Q9H488 388 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 SERHL2Q9H4I8 314 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 HAUS4Q9H6D7 363 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 WASH6PQ9NQA3 447 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 FGF21Q9NSA1 209 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ING3Q9NXR8 418 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 NFKBIL1Q9UBC1 381 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 MYO1AQ9UBC5 1043 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 PSMD13Q9UNM6 376 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 CFAP20Q9Y6A4 193 aaKnown RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 FLNAP21333 2647 aaKnown RBP4.44□□□□□ -1.7
CKS1B-207ENST00000477676 HCFC1P51610 2035 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 SCN3AQ9NY46 2000 aa4.44□□□□□ -1.7
CKS1B-207ENST00000477676 ZANQ9Y493 2812 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms