RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 ATP12AP54707 1039 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 TAS2R40P59535 323 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 RAB4BP61018 213 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 IGBP1P78318 339 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CCNA1P78396 465 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 EMX1Q04741 257 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 UBE3AQ05086 875 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 DPTQ07507 201 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 LGALS3BPQ08380 585 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 SPIRE1Q08AE8 756 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CDH17Q12864 832 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ADAM15Q13444 863 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 KEAP1Q14145 624 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 FASTKQ14296 549 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF273Q14593 569 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF169Q14929 603 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CLCA4Q14CN2 919 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 NOMO1Q15155 1222 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 QPRTQ15274 297 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 AANATQ16613 207 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CA9Q16790 459 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 MICAQ29983 383 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 LRRC26Q2I0M4 334 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 NRN1LQ496H8 165 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 FAM98BQ52LJ0 330 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 SETMARQ53H47 684 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 IGSF11Q5DX21 431 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 SPANXN3Q5MJ09 141 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 LDLRAP1Q5SW96 308 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 HES5Q5TA89 166 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 MLIPQ5VWP3 458 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ANKRD22Q5VYY1 191 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CES4AQ5XG92 561 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 REP15Q6BDI9 236 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 TMEM65Q6PI78 240 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CNSTQ6PJW8 725 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 TEX261Q6UWH6 196 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ISLR2Q6UXK2 745 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 TFAP2EQ6VUC0 442 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 LBX2Q6XYB7 198 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CATSPERGQ6ZRH7 1159 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ZCCHC23Q6ZST2 131 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 C1orf186Q6ZWK4 172 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 KCTD1Q719H9 257 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 C16orf62Q7Z3J2 963 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 PIWIL3Q7Z3Z3 882 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 SLC47A2Q86VL8 602 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 HIPK1Q86Z02 1210 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 P3H2Q8IVL5 708 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CMTR2Q8IYT2 770 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 GHDCQ8N2G8 530 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ARRDC4Q8NCT1 418 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CHDHQ8NE62 594 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 OR4D10Q8NGI6 311 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 OR8K3Q8NH51 312 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 C9orf43Q8TAL5 461 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 NDNFQ8TB73 568 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 BPIFB1Q8TDL5 484 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 BRI3BPQ8WY22 251 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ELMO1Q92556 727 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 AKAP1Q92667 903 aaKnown RBP eCLIP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 NSMCE2Q96MF7 247 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 GPR137Q96N19 417 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 RBM14Q96PK6 669 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 APOL2Q9BQE5 337 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 WDR83Q9BRX9 315 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 IER2Q9BTL4 223 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 MLPHQ9BV36 600 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ITPAQ9BY32 194 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 FGFBP2Q9BYJ0 223 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 TRIM8Q9BZR9 551 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 UCK2Q9BZX2 261 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 SHARPINQ9H0F6 387 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 RNF121Q9H920 327 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 FOLH1BQ9HBA9 442 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ASAH2Q9NR71 780 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 C1orf112Q9NSG2 853 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 IMP3Q9NV31 184 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 INTS7Q9NVH2 962 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 FAM118AQ9NWS6 357 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 LYARQ9NX58 379 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 TRPM5Q9NZQ8 1165 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 EXTL2Q9UBQ6 330 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 EPHA6Q9UF33 1036 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 UBQLN2Q9UHD9 624 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 MAGEL2Q9UJ55 1249 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 INTS6Q9UL03 887 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 EMCNQ9ULC0 261 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 CNTN6Q9UQ52 1028 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 BAIAP2Q9UQB8 552 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 AURKCQ9UQB9 309 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 LIPT1Q9Y234 373 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 TNPO3Q9Y5L0 923 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 U3KQ87 197 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 ZNFX1Q9P2E3 1918 aaKnown RBP4.58□□□□□ -1.68
PTCD3-212ENST00000477520 LOC285556D6RIA3 1793 aa4.58□□□□□ -1.68
PTCD3-212ENST00000477520 A0A0X1KG70 313 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 PIPSLA2A3N6 862 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 G3V2T6 193 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms